Quan Zuo, Qian Sun, Pei-Yi Wang, Yi-Tong Song, Fang-Xu Han, Xi Chen, Feng-Yi Li, Wen-Cheng Shi, Shi-Hui Niu
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We conducted a genome-wide identification of secondary cell wall biosynthesis pathway genes in P. tabuliformis, and genome-wide DNA affinity purification analysis uncovered that PtARN direct binding to promoters of 189 secondary cell wall biosynthesis genes. Strikingly, PtARN represses PtMYB162, a lignin biosynthesis suppressor, forming a regulatory cascade to fine-tune lignification. Collectively, our work establishes PtARN as a master regulator orchestrating age-dependent secondary cell wall deposition and lignification in the secondary xylem of Chinese pine, and delineates a previously uncharacterized PtDAL1-PtARN-mediated molecular regulatory network in P. tabuliformis. 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引用次数: 0
摘要
针叶树在木材发育过程中表现出明显的年龄相关转变,但控制这些变化的分子机制仍不清楚。在这里,我们整合了多组学和功能分析来揭示油松(Pinus tabuliformis)年龄相关木材形成的转录调控网络。横截面和拉曼显微光谱分析显示,次生木质部木质化和碳水化合物沉积的增强与年龄相关,与髓比例的增加相一致。时间转录组分析发现PtARN (age- related NAC TRANSCRIPTION FACTOR)是一个关键的年龄相关调节因子,其表达是由保守的年龄计时器PtDAL1通过启动子结合直接激活的。我们对油状假单胞菌的次生细胞壁生物合成途径基因进行了全基因组鉴定,全基因组DNA亲和纯化分析发现,PtARN直接结合189个次生细胞壁生物合成基因的启动子。引人注目的是,PtARN抑制木质素生物合成抑制因子PtMYB162,形成调控级联以微调木质素化。总之,我们的工作确定了PtARN是协调油松次生木质部年龄依赖性次生细胞壁沉积和木质素化的主要调节剂,并描绘了油松中ptdal1 -PtARN介导的分子调节网络。这些发现极大地促进了我们对针叶树木材形成的分子调控网络的理解,并将发育时间与细胞壁重塑联系起来,为针叶树木材形成的研究提供了一个强有力的框架。
The NAC Transcription Factor PtARN Governs Age-Related Wood Formation via a PtDAL1-PtARN Regulatory Cascade in Chinese Pine.
Conifers exhibit distinct age-related transitions in wood development, yet the molecular mechanisms governing these changes remain poorly characterized. Here, we integrate multi-omics and functional analyses to unravel a transcriptional regulatory network underlying age-related wood formation in Chinese pine (Pinus tabuliformis). Cross-sectional and Raman microspectroscopy analyses revealed age-dependent enhancement of lignification and carbohydrate deposition in secondary xylem, coinciding with increased pith proportion. Temporal transcriptome profiling identified PtARN (AGE-RELATED NAC TRANSCRIPTION FACTOR) as a key age-correlated regulator, whose expression is directly activated by the conserved age timer PtDAL1 through promoter binding. We conducted a genome-wide identification of secondary cell wall biosynthesis pathway genes in P. tabuliformis, and genome-wide DNA affinity purification analysis uncovered that PtARN direct binding to promoters of 189 secondary cell wall biosynthesis genes. Strikingly, PtARN represses PtMYB162, a lignin biosynthesis suppressor, forming a regulatory cascade to fine-tune lignification. Collectively, our work establishes PtARN as a master regulator orchestrating age-dependent secondary cell wall deposition and lignification in the secondary xylem of Chinese pine, and delineates a previously uncharacterized PtDAL1-PtARN-mediated molecular regulatory network in P. tabuliformis. These findings significantly advance our understanding of the molecular regulatory network underlying wood formation in conifers, and bridging developmental timing with cell wall remodelling, and provide a robust framework for conifer-specific wood formation studies.
期刊介绍:
Plant, Cell & Environment is a premier plant science journal, offering valuable insights into plant responses to their environment. Committed to publishing high-quality theoretical and experimental research, the journal covers a broad spectrum of factors, spanning from molecular to community levels. Researchers exploring various aspects of plant biology, physiology, and ecology contribute to the journal's comprehensive understanding of plant-environment interactions.