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Light Limitation and Foliar Pathogenic Infection Impact Phloem Anatomy and Function in Pinus radiata D. Don. 光照限制和叶面病原菌侵染对辐射松韧皮部解剖和功能的影响。
IF 6 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-05-14 DOI: 10.1111/pce.15610
Mireia Gómez-Gallego, Damien Sellier, Alan Dickson, Martin K-F Bader, Sebastian Leuzinger, Nari Williams

Phloem plays a major role in plant physiology, health and growth. However, little research has addressed the impact of biotic and abiotic stressors on phloem structure and development. This study extends recent interest on stress impact on phloem to further understand its physiological limits by exploring a common combination of stressors within forest systems: reduced light availability and concomitant foliar pathogenic infection. We compared juvenile Pinus radiata D. Don. plants growing under optimal light conditions to plants growing under reduced light availability and exposure to pathogenic infection. We monitored foliar gas exchange and took destructive samples for nonstructural carbohydrate (NSC) analysis and phloem anatomy in spring and early summer. We used software-assisted image analysis to determine cell composition and area of conducting phloem, and a fluid dynamics model to derive phloem hydraulic parameters. Phloem showed environmental plasticity within the same growing season. We found changes in phloem anatomy in shaded and infected plants, including an increased sieve cell density and permeability, and reduced cell wall thickness. While intrinsic phloem hydraulic efficiency was maintained at the tissue level in stressed plants, the reduction in phloem cross-sectional area resulted in an eventual decline in phloem sap flow rate. Thus, phloem cross-sectional area was dynamically adjusted to match reduced translocation requirements. In addition, shaded and infected plants experienced reduced growth and C assimilation, as well as greater necrotic photosynthetic tissue, but showed similar levels of total NSC than control plants. The high levels of NSC observed in our stressed plants are an important finding that suggests that radial growth cessation and, by association, phloem formation impairment are induced by sink limitation instead of reduced carbohydrate supply to the meristem.

韧皮部在植物的生理、健康和生长中起着重要作用。然而,关于生物和非生物胁迫源对韧皮部结构和发育的影响的研究很少。本研究通过探索森林系统中常见的压力源组合:光可用性降低和伴随的叶面致病性感染,扩展了最近对韧皮部胁迫影响的兴趣,进一步了解其生理极限。我们比较了辐射松(Pinus radiata D. Don)幼松。在最佳光照条件下生长的植物与在光照利用率降低和暴露于致病性感染下生长的植物比较。在春季和初夏对叶片气体交换进行监测,并采集破坏性样品进行非结构碳水化合物分析和韧皮部解剖。我们使用软件辅助图像分析来确定导电韧皮部的细胞组成和面积,并使用流体动力学模型来推导韧皮部的水力参数。韧皮部在同一生长季节表现出环境可塑性。我们发现遮荫和侵染植物韧皮部解剖结构发生了变化,包括筛细胞密度和通透性增加,细胞壁厚度减少。虽然韧皮部固有水力效率维持在组织水平,但韧皮部截面积的减少最终导致韧皮部液流速率的下降。因此,韧皮部横截面积被动态调整以匹配减少的转运需求。此外,遮荫和侵染植株的生长和C同化减少,光合组织坏死加剧,但总NSC水平与对照植株相近。在我们的胁迫植物中观察到的高水平NSC是一个重要的发现,表明径向生长停止和韧皮部形成损伤是由汇限制引起的,而不是由分生组织碳水化合物供应减少引起的。
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引用次数: 0
A Holistic Investigation of Arabidopsis Proteomes Altered in Chloroplast Biogenesis and Retrograde Signalling Identifies PsbO as a Key Regulator of Chloroplast Quality Control. 拟南芥叶绿体生物发生和逆行信号中蛋白质组改变的整体研究表明PsbO是叶绿体质量控制的关键调节因子。
IF 6 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-05-14 DOI: 10.1111/pce.15611
Dario Di Silvestre, Nicolaj Jeran, Guido Domingo, Candida Vannini, Milena Marsoni, Stefania Fortunato, Maria Concetta de Pinto, Alberto Tamborrino, Yuri Luca Negroni, Michela Zottini, Lien Tran Hong, Andrea Lomagno, Pierluigi Mauri, Paolo Pesaresi, Luca Tadini

Communication between the diverse compartments of plant cells relies on an intricate network of molecular interactions that orchestrate organellar development and adaptation to environmental conditions. Plastid-to-nucleus signalling pathways play a key role in relaying information from developing, mature, and damaged or disintegrating chloroplasts to the nucleus, which serves to coordinate gene expression between the two genomes. To shed light on these mechanisms, we performed a comprehensive analysis of the response of the Arabidopsis thaliana proteomes to perturbation of chloroplast biogenesis by the antibiotic lincomycin (Lin) in the absence of GENOMES UNCOUPLED 1 (GUN1), a key player in plastid-to-nucleus signalling. The topological analysis of protein-protein interactions (PPIs) and co-expression networks enabled the identification of protein hubs in each genotype and condition tested, and highlighted whole-cell adaptive responses to the disruption of chloroplast biogenesis. Our findings reveal a novel role for PsbO, a subunit of the oxygen-evolving complex (OEC), which behaves as an atypical photosynthetic protein upon inhibition of plastid protein synthesis. Notably, and unlike all other subunits of the thylakoid electron transport chain, PsbO accumulates in non-photosynthetic plastids, and is crucial for the breakdown of damaged chloroplasts.

植物细胞不同区室之间的交流依赖于一个复杂的分子相互作用网络,该网络协调了细胞器的发育和对环境条件的适应。质体到细胞核的信号通路在叶绿体发育、成熟、受损或解体向细胞核传递信息中起着关键作用,从而协调两个基因组之间的基因表达。为了阐明这些机制,我们对拟南芥蛋白质组学对抗生素林可霉素(lincomycin, Lin)干扰叶绿体生物发生的反应进行了全面分析,在基因组UNCOUPLED 1 (GUN1)缺失的情况下,基因组UNCOUPLED 1 (GUN1)是质体到细胞核信号传导的关键角色。蛋白质-蛋白质相互作用(PPIs)和共表达网络的拓扑分析使鉴定每个基因型和测试条件下的蛋白质中心成为可能,并强调了叶绿体生物发生中断时的全细胞适应性反应。我们的研究结果揭示了PsbO的新作用,它是氧进化复合体(OEC)的一个亚基,在抑制质体蛋白合成时表现为非典型光合蛋白。值得注意的是,与类囊体电子传递链的所有其他亚基不同,PsbO在非光合质体中积累,对受损叶绿体的分解至关重要。
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引用次数: 0
Tree Growth, Contraction and Recovery: Disentangling Soil and Atmospheric Drought Effects. 树木生长、收缩和恢复:解开土壤和大气干旱的影响。
IF 6 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-05-14 DOI: 10.1111/pce.15604
Erez Feuer, Yakir Preisler, Eyal Rotenberg, Dan Yakir, Yair Mau

We investigate how soil and atmospheric droughts jointly impact tree growth and recovery dynamics in a semi-arid pine forest, leveraging high-resolution stem diameter variation data and an irrigation experiment. The irrigated plot, where soil drought was mitigated, served as a benchmark to isolate the effects of atmospheric drought and distinguish them from the compound drought conditions experienced by control trees. Using a suite of tools based only on stem diameter variation, we identified growth modes that vary in accordance with soil water availability. Control trees showed negligible growth during the dry season but rapidly recovered with the onset of the wet season, matching the baseline growth rates of the irrigated trees, suggesting minimal compromise in hydraulic functioning. Our main finding is that heatwaves consistently depress stem-expansion rates, regardless of treatment. However, during the dry season, this negative impact diverges sharply between the treatments. Because irrigated trees benefit from a hydraulic buffer supplied by ample soil water and thus retain a positive growth baseline, the depression merely slows their expansion, whereas control trees already near zero are driven into net contraction. These findings offer new understanding of how trees balance growth, contraction, and recovery under varying drought conditions, revealing the pivotal role of soil water in shaping drought responses across seasons. As climate change intensifies the frequency and severity of drought events, this knowledge is critical for anticipating shifts in tree growth and resilience.

利用高分辨率茎径变化数据和灌溉试验,研究了土壤和大气干旱如何共同影响半干旱松林树木的生长和恢复动态。土壤干旱得到缓解的灌溉区可以作为分离大气干旱影响的基准,并将其与对照树所经历的复合干旱条件区分开来。使用一套仅基于茎直径变化的工具,我们确定了根据土壤水分有效性而变化的生长模式。对照树在旱季表现出可以忽略不计的生长,但随着雨季的开始迅速恢复,与灌溉树的基线生长速率相匹配,表明水力功能的最小损害。我们的主要发现是,无论治疗方法如何,热浪都会持续抑制茎的扩张率。然而,在旱季,这种负面影响在不同处理之间差异很大。由于灌溉树木受益于充足的土壤水提供的水力缓冲,从而保持了正的生长基线,因此洼地只是减缓了它们的扩张,而已经接近于零的对照树木则被逼入净收缩。这些发现为树木在不同干旱条件下如何平衡生长、收缩和恢复提供了新的认识,揭示了土壤水分在塑造不同季节的干旱反应中的关键作用。随着气候变化加剧了干旱事件的频率和严重程度,这些知识对于预测树木生长和恢复能力的变化至关重要。
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引用次数: 0
Mining Genetic Variations Reveals the Differentiation of Gene Alternative Polyadenylation Involving in Rice Panicle Architecture Regulation. 挖掘遗传变异揭示水稻穗型结构调控中基因选择性聚腺苷化的分化。
IF 6 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-05-13 DOI: 10.1111/pce.15618
Chuanjia Liu, Xinye Wu, Qiong Zhao, Muhammad Fahad, Zhen Liu, Liang Wu

Panicle architecture is a critical determinant of rice yield and resilience, yet the genetic and environmental factors shaping this trait remain incompletely understood. Here, we applied an integrative genomic approach combining multi-locus association mapping, transcriptome analysis and population genomics to dissect the genetic basis of key panicle traits in rice. We identified robust genetic loci underlying the number of primary branches, panicle length and spikelets per panicle, with many showing sensitivity to temperature, underscoring the importance of gene-environment interactions for yield stability. Notably, we discovered that variation in alternative polyadenylation (APA) of specific transcripts is associated with panicle trait diversity at the population level, suggesting that regulatory mechanisms such as APA are significant contributors to phenotypic plasticity and adaptation. These findings deliver both novel candidate genes in panicle development and mechanistic insights to support the breeding of rice varieties with enhanced productivity and climate resilience.

穗型结构是水稻产量和抗逆性的关键决定因素,但形成这一性状的遗传和环境因素尚不完全清楚。本研究采用多位点关联图谱、转录组分析和群体基因组学相结合的综合基因组学方法,剖析了水稻穗部关键性状的遗传基础。我们发现了与一次分枝数量、穗长和每穗颖花数相关的强大遗传位点,其中许多位点对温度敏感,强调了基因-环境相互作用对产量稳定性的重要性。值得注意的是,我们发现特定转录本的选择性多聚腺苷化(APA)的变化与群体水平上的穗性状多样性有关,这表明APA等调节机制是表型可塑性和适应性的重要贡献者。这些发现提供了新的穗发育候选基因和机制见解,以支持培育具有更高生产力和气候适应能力的水稻品种。
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引用次数: 0
Molecular Regulatory Network of Soybean Responses to Abiotic Stress. 大豆对非生物胁迫响应的分子调控网络。
IF 6 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-05-12 DOI: 10.1111/pce.15600
Xiaomei Fang, Jian Zhang, Caiyun Fan, Baohui Liu, Fanjiang Kong, Haiyang Li

Global climate change exacerbates the impact of environmental stressors such as drought, salinity and extreme temperatures on crop growth and grain yield, endangering the sustainability of the food supply. Soybean (Glycine Max [L.] Merr.) is an important legume crop and plays a crucial role in the global food supply chain and food security, and contributes the substantial protein content relative to other crops. However, soybean yield stability is critically dependent on the plant's adaptive responses to abiotic stress factors, particularly drought, salinity and temperature extremes, which primarily impact its growth and productivity. Recently, various molecular techniques, including genetic engineering, transcriptomics, transcription factor analysis, CRISPR/Cas9, and conventional methods, have been employed to elucidate the molecular mechanisms of soybean responses to environmental stresses for the breeding of tolerant cultivars of soybean. This review summarises recent advances in dissecting the genetic factors and networks that contribute to soybean abiotic stress tolerance through diverse strategies. We also discuss future challenges and opportunities for the development of climate-resilient soybean varieties. Consequently, the updated review will serve as a comprehensive guideline for researchers investigating the genetic mechanism of abiotic stress in soybean.

全球气候变化加剧了干旱、盐度和极端温度等环境压力因素对作物生长和粮食产量的影响,危及粮食供应的可持续性。大豆(Glycine Max) [L];[Merr.])是一种重要的豆科作物,在全球粮食供应链和粮食安全中起着至关重要的作用,相对于其他作物,它提供了大量的蛋白质含量。然而,大豆产量的稳定性严重依赖于植物对非生物胁迫因素的适应性反应,特别是干旱、盐度和极端温度,这些因素主要影响其生长和生产力。近年来,利用基因工程、转录组学、转录因子分析、CRISPR/Cas9和常规方法等多种分子技术,研究大豆对环境胁迫响应的分子机制,以选育耐环境胁迫的大豆品种。本文综述了通过多种策略对大豆非生物胁迫耐受的遗传因素和网络的研究进展。我们还讨论了未来发展气候适应型大豆品种的挑战和机遇。因此,这一最新综述将为研究大豆非生物胁迫的遗传机制提供全面的指导。
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引用次数: 0
Loss of DET1 in High Pigment 2 Tomato Prevents High Temperature Repression of Anthocyanin Biosynthesis in Fruit Through HY5 Stabilization. 高色素2型番茄中DET1的损失通过HY5稳定化防止果实中花青素合成的高温抑制
IF 6 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-05-11 DOI: 10.1111/pce.15586
Jacopo Menconi, Noemi La Monaca, Irene Cataldo, Pietro Maria Niccolini, Pierdomenico Perata, Silvia Gonzali

Global warming impacts several aspects of plant physiology, with important negative effects on crop yield and production of secondary metabolites, such as anthocyanins. The anthocyanin content of vegetables and fruits has attracted public interest in the last two decades due to its health benefits, leading to the development of novel anthocyanin-enriched plant varieties, including purple tomato lines. In purple tomato fruits anthocyanin biosynthesis is largely regulated by light through HY5, whose levels are in turn controlled by COP1-targeted destabilization, and increasing temperatures strongly impair anthocyanin accumulation in the fruit peel. Interestingly, two different COP1-encoding genes exist in tomato and one of them is further involved in alternative splicing, giving origin to polypeptides characterized by different lengths and, possibly, functions. High temperatures trigger HY5 degradation under light through nuclear relocation and interaction with DET1 of both COP1 tomato factors. high pigment 2 (hp2) tomato plants bear a nonfunctional det1 allele and show exacerbate photomorphogenesis due to HY5 stabilization. In this paper, we show that the COP1-DET1-HY5 switch is crucial for the high temperature-induced repression of anthocyanin synthesis in purple fruits. The loss of DET1 indeed impedes COP1 activity in degrading HY5, allowing sustained anthocyanin accumulation under light even under high temperatures. All COP1 tomato factors seem to require DET1 to target HY5 to proteolysis, but only COP1-like X1 isoform gene is also transcriptionally regulated by HY5, whereas the expression of COP1 homolog is not affected by the mutation of DET1. Furthermore, whereas the expression of COP1 homolog is stable and independent from temperature, the canonical transcript of COP1-like X1 isoform, possibly producing the polypeptide containing all the functional domains, is also enhanced by higher temperatures. The introgression of the hp2 mutation in purple tomato lines can thus counteract the high temperature-induced reduction in anthocyanin accumulation, representing a key strategy to preventing global warming-related loss of quality in tomatoes.

全球变暖影响了植物生理的几个方面,对作物产量和花青素等次生代谢产物的生产产生了重要的负面影响。在过去的二十年里,蔬菜和水果中的花青素含量因其对健康的益处而引起了公众的兴趣,导致了富含花青素的新型植物品种的开发,包括紫色番茄品系。在紫色番茄果实中,花青素的生物合成在很大程度上受光通过HY5调控,而HY5的水平又受cop1靶向不稳定的控制,温度的升高严重损害了花青素在果皮中的积累。有趣的是,番茄中存在两个不同的cop1编码基因,其中一个基因进一步参与了选择性剪接,从而产生了具有不同长度和可能的功能的多肽。高温通过核重定位和与两个COP1番茄因子DET1的相互作用触发HY5在光照下的降解。高色素2 (hp2)番茄植株具有非功能性det1等位基因,由于HY5的稳定,其光形态发生加剧。在本文中,我们证明了COP1-DET1-HY5开关对于高温诱导的紫色果实花青素合成抑制至关重要。DET1的损失确实阻碍了COP1降解HY5的活性,即使在高温下也能在光照下持续积累花青素。所有COP1番茄因子似乎都需要DET1靶向HY5进行蛋白水解,但只有COP1样X1亚型基因也受HY5的转录调控,而COP1同源基因的表达不受DET1突变的影响。此外,虽然COP1同源物的表达稳定且不受温度的影响,但COP1样X1亚型的标准转录本可能产生包含所有功能域的多肽,并且在较高的温度下也会增强。因此,紫色番茄品系中hp2突变的渗入可以抵消高温导致的花青素积累减少,这是防止全球变暖导致番茄品质下降的关键策略。
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引用次数: 0
The Whole Is Not Always the Sum of the Parts: Synergistic Plant Responses to Combined Environmental Stresses. 整体并不总是部分的总和:植物对综合环境胁迫的协同反应。
IF 6 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-05-11 DOI: 10.1111/pce.15616
Vítor Amorim-Silva, Miguel A Botella
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引用次数: 0
Genetic and Epigenetic Views of the Adaptive Evolution of Oaks (Quercus L.). 栎(Quercus L.)适应性进化的遗传和表观遗传学观点。
IF 6 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-05-11 DOI: 10.1111/pce.15603
Kai-Lu Zhang, Shi-Yu Huang, Yao Li, Mo-Xian Chen, Fu-Yuan Zhu, Yan-Ming Fang

The long-lived angiosperm Quercus L. (Oaks) have emerged as promising model organisms for investigating adaptive divergence and ecological environmental interactions due to their longevity and large genetic diversity as well as recurrent gene flow among species with diverse natural habitats. Until recently, numerous genomic studies by new high-throughput sequencing platforms have provided access to link genes with ecological and physiological traits. However, the genetic and epigenetic mechanisms underlying the adaptive evolution of oak trees are still poorly understood. In this review, we summarise the current progress of reported oak genomes and inheritance systems, analysing the epigenetics and genetic structure of oaks. We review evidence regarding the genetic mechanism linking introgressive hybridisation and reproductive isolation for a better understanding of adaptive divergence and defining speciation in oaks. Furthermore, we also discuss the interaction and evolution between oaks, other organisms and the environment to explore the adaptive strategies and coevolutionary mechanisms among them. Through the impact of this article, hopefully, a distinctive avenue could be established to further study the inheritance, ecology and multidimensional evolution of oaks.

长寿被子植物栎(栎)由于其长寿和巨大的遗传多样性,以及在不同自然栖息地物种间反复的基因流动,已成为研究适应分化和生态环境相互作用的有希望的模式生物。直到最近,通过新的高通量测序平台进行的大量基因组研究已经提供了将基因与生态和生理性状联系起来的途径。然而,橡树适应性进化的遗传和表观遗传机制仍然知之甚少。本文综述了橡树基因组和遗传系统的研究进展,分析了橡树的表观遗传学和遗传结构。为了更好地理解橡树的适应性分化和定义物种形成,我们回顾了有关渐渗杂交和生殖隔离的遗传机制的证据。此外,我们还讨论了橡树与其他生物与环境之间的相互作用和进化,探讨了它们之间的适应策略和共同进化机制。希望通过本文的影响,为进一步研究橡树的遗传、生态和多维进化开辟一条独特的途径。
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引用次数: 0
Protection of Photosynthesis by UVR8 and Cryptochromes in Arabidopsis Under Blue and UV Radiation. 蓝光和紫外线辐射下UVR8和隐色素对拟南芥光合作用的保护作用
IF 6 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-05-11 DOI: 10.1111/pce.15608
Luis Orlando Morales, Alexey Shapiguzov, Neha Rai, Pedro José Aphalo, Mikael Brosché

Photosynthesis in plants is negatively affected by high light intensity and UV radiation. The photoreceptors UV RESISTANCE LOCUS 8 (UVR8) and CRYPTOCHROMES (CRYs) mediate perception and acclimation of plants to UV-B/UV-A2 (290-340 nm) and UV-A1/blue light (350-500 nm), respectively. However, their roles in photoprotection of photosynthesis across different wavebands of the spectrum remain unclear. Using chlorophyll fluorescence and LED lighting we studied the roles of UVR8 and CRYs in maintaining photosynthetic capacity in Arabidopsis exposed to UV-B, UV-A1, and blue light. Analysis of quantum yield of Photosystem II, nonphotochemical quenching, and LHCII phosphorylation demonstrated that CRYs preserve photosynthetic performance in plants exposed to UV-B, UV-A1, and blue light. UVR8 and CRYs exhibit partially redundant functions in maintaining photosynthetic activity under UV-B, UV-A1, and blue light, and in preventing photodamage under high UV-A1 irradiance. Impaired UVR8 and CRY signalling reduced epidermal flavonol accumulation in leaves, which further compromised photoprotection. These findings provide valuable insights into how UV and blue light perception contribute to photoprotection, with broad implications for plant performance both in natural and managed environments.

植物光合作用受到强光和紫外线辐射的不利影响。光感受器UV RESISTANCE LOCUS 8 (UVR8)和CRYPTOCHROMES (CRYs)分别介导植物对UV- b /UV- a2 (290-340 nm)和UV- a1 /蓝光(350-500 nm)的感知和驯化。然而,它们在不同光谱波段的光合作用中的光保护作用尚不清楚。利用叶绿素荧光和LED照明研究了UVR8和CRYs在UV-B、UV-A1和蓝光照射下维持拟南芥光合能力的作用。对光系统II的量子产率、非光化学猝灭和LHCII磷酸化的分析表明,在暴露于UV-B、UV-A1和蓝光下的植物中,CRYs保持了光合性能。UVR8和CRYs在UV-B、UV-A1和蓝光下维持光合活性以及在高UV-A1照射下防止光损伤方面表现出部分冗余功能。受损的UVR8和CRY信号减少了叶片中表皮黄酮醇的积累,进一步损害了光保护。这些发现为了解紫外线和蓝光感知如何促进光保护提供了有价值的见解,对植物在自然和人工环境中的表现具有广泛的影响。
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引用次数: 0
BdUth1 Mediates Mitophagy by Recruiting BdAtg8 to Govern the Pathogenicity of Botryosphaeria dothidea. BdUth1通过募集bduth8介导线粒体自噬调控植物球孢菌的致病性。
IF 6 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-05-11 DOI: 10.1111/pce.15615
Shuai Meng, Meng Xiong, Yu Sun, Xiong Xiong, Longjun Cheng, Chaoxi Luo, Li Wang, Shufen Chao
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引用次数: 0
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