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Nuclear PPR Proteins Mediate Rhythmic C-To-U Editing of Mitochondrial RNA in Maize and Rice. 核PPR蛋白介导玉米和水稻线粒体RNA节律性C-To-U编辑
IF 6.9 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-11-01 Epub Date: 2026-07-17 DOI: 10.1111/pce.70748
Qiuxin Kan, Guo Chen, Yizhe Jiang, Lin Li, Qing Li

Mitochondrial activity must be tightly coordinated in plants to ensure that energy production is appropriately modulated in response to exogenous and endogenous signals. However, the underlying molecular mechanisms are largely unknown. Here, we investigated this issue by analysing the crosstalk between the nucleus and mitochondria mediated by pentatricopeptide repeat (PPR) proteins, which can regulate the proper function of mitochondrial electron transport chain complexes by affecting C-to-U editing of mitochondrial mRNA. More than 75% of PPR genes in maize (Zea mays) exhibited rhythmic expression, which changed in response to different light conditions. Analysis of mitochondrial RNA editing efficiency throughout the day identified editing sites displaying rhythmic variations, with many sites affecting protein function based on AlphaFold2 prediction. Notably, the peak phase of rhythmic RNA editing lagged behind that of PPR gene expression, suggesting that these two processes are tightly related. We also observed rhythmic expression of PPR genes and rhythmic editing of mitochondrial mRNA in rice (Oryza sativa). These findings suggest that PPR proteins might serve as integrators of environmental signals and transmit these signals to mitochondria by affecting RNA editing.

在植物中,线粒体的活动必须紧密协调,以确保能量生产在响应外源和内源信号时得到适当的调节。然而,潜在的分子机制在很大程度上是未知的。本研究通过分析五肽重复(pentatricopeptide repeat, PPR)蛋白介导的核与线粒体之间的串扰,探讨了这一问题。PPR蛋白可以通过影响线粒体mRNA的C-to-U编辑来调节线粒体电子传递链复合物的正常功能。玉米(Zea mays)中超过75%的PPR基因表现出节律性表达,这种表达随光照条件的变化而变化。全天对线粒体RNA编辑效率的分析发现,编辑位点表现出节律性变化,其中许多位点影响基于AlphaFold2预测的蛋白质功能。值得注意的是,节律性RNA编辑的高峰期滞后于PPR基因表达的高峰期,这表明这两个过程密切相关。我们还观察到水稻(Oryza sativa)中PPR基因的节律性表达和线粒体mRNA的节律性编辑。这些发现表明,PPR蛋白可能作为环境信号的整合者,并通过影响RNA编辑将这些信号传递给线粒体。
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引用次数: 0
PagCOBL5 Integrates Transcriptional and Spatial Cues to Confer G-Layer Deposition in Poplar. PagCOBL5整合转录和空间线索决定杨树g层沉积。
IF 6.9 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-11-01 Epub Date: 2026-08-02 DOI: 10.1111/pce.70773
Xinwei Zhao, Qiao Wang, Liyuan Zhang, Tongfang Yu, Wei Guo

Angiosperm trees reorient their stems by producing tension wood (TW), a specialised xylem that generates contractile force. TW fibres develop a gelatinous (G) layer rich in cellulose, yet the molecular mechanisms governing G-layer formation remain poorly understood. COBRA-like genes encode glycosylphosphatidylinositol (GPI)-anchored proteins known to regulate cellulose deposition. Here, we functionally characterised PagCOBL5 in hybrid poplar (Populus alba × P. glandulosa) by identifying its upstream regulator and interaction partner. PagCOBL5 was preferentially expressed in mature xylem fibres, with high abundance in TW. Under mechanical stress, cobl5 knockout mutants exhibited impaired negative gravitropism and significantly thinner G-layer-phenotypes that were reversed in PagCOBL5-overexpressing lines. Furthermore, we found that the transcription factors PagLBD21 and PagLBD25 participate in the upstream negative regulation of PagCOBL5 expression, with the lbd21 lbd25/+ mutant exhibiting an enhanced gravitropic response and altered xylem cell differentiation. At the protein level, PagCOBL5 directly interacted with the cellulose synthase subunits PagCESA8b. This interaction positions PagCOBL5 as a key component recruited and spatially organised by the directionally moving cellulose synthase complex (CSC). Together, these results reveal a sophisticated regulatory and protein-interaction framework centred on PagCOBL5, providing pivotal molecular insights into how transcriptional modulation and cellulose synthase complexes coordinate G-layer formation and mechanical force generation during the gravitropic response.

被子植物树通过产生张力木(TW)来重新定位它们的茎,张力木是一种特殊的木质部,可以产生收缩力。TW纤维形成一层富含纤维素的胶状(G)层,然而控制G层形成的分子机制仍然知之甚少。眼镜蛇样基因编码糖基磷脂酰肌醇(GPI)锚定蛋白,已知可调节纤维素沉积。本文通过鉴定杂交杨树(Populus alba × P. glandulosa)中PagCOBL5的上游调控因子和相互作用伙伴,对其进行了功能表征。PagCOBL5在成熟木质部纤维中优先表达,在TW中丰度较高。在机械应力下,cobl5敲除突变体表现出负向重力性受损,g层表型明显变薄,而在过表达pagcobl5的细胞系中,这一现象被逆转。此外,我们发现转录因子PagLBD21和PagLBD25参与了PagCOBL5表达的上游负调控,其中lbd21 lbd25/+突变体表现出增强的向地性反应和木质部细胞分化的改变。在蛋白质水平上,PagCOBL5直接与纤维素合成酶亚基PagCESA8b相互作用。这种相互作用将PagCOBL5定位为定向移动的纤维素合成酶复合体(CSC)招募和空间组织的关键成分。总之,这些结果揭示了以PagCOBL5为中心的复杂调控和蛋白质相互作用框架,为转录调节和纤维素合酶复合物如何协调g层形成和在向地性反应中产生机械力提供了关键的分子见解。
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引用次数: 0
The NAC Transcription Factor PtARN Governs Age-Related Wood Formation via a PtDAL1-PtARN Regulatory Cascade in Chinese Pine. NAC转录因子PtARN通过PtDAL1-PtARN调控级联调控油松年龄相关的木材形成。
IF 6.9 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-11-01 Epub Date: 2026-07-30 DOI: 10.1111/pce.70776
Quan Zuo, Qian Sun, Pei-Yi Wang, Yi-Tong Song, Fang-Xu Han, Xi Chen, Feng-Yi Li, Wen-Cheng Shi, Shi-Hui Niu

Conifers exhibit distinct age-related transitions in wood development, yet the molecular mechanisms governing these changes remain poorly characterized. Here, we integrate multi-omics and functional analyses to unravel a transcriptional regulatory network underlying age-related wood formation in Chinese pine (Pinus tabuliformis). Cross-sectional and Raman microspectroscopy analyses revealed age-dependent enhancement of lignification and carbohydrate deposition in secondary xylem, coinciding with increased pith proportion. Temporal transcriptome profiling identified PtARN (AGE-RELATED NAC TRANSCRIPTION FACTOR) as a key age-correlated regulator, whose expression is directly activated by the conserved age timer PtDAL1 through promoter binding. We conducted a genome-wide identification of secondary cell wall biosynthesis pathway genes in P. tabuliformis, and genome-wide DNA affinity purification analysis uncovered that PtARN direct binding to promoters of 189 secondary cell wall biosynthesis genes. Strikingly, PtARN represses PtMYB162, a lignin biosynthesis suppressor, forming a regulatory cascade to fine-tune lignification. Collectively, our work establishes PtARN as a master regulator orchestrating age-dependent secondary cell wall deposition and lignification in the secondary xylem of Chinese pine, and delineates a previously uncharacterized PtDAL1-PtARN-mediated molecular regulatory network in P. tabuliformis. These findings significantly advance our understanding of the molecular regulatory network underlying wood formation in conifers, and bridging developmental timing with cell wall remodelling, and provide a robust framework for conifer-specific wood formation studies.

针叶树在木材发育过程中表现出明显的年龄相关转变,但控制这些变化的分子机制仍不清楚。在这里,我们整合了多组学和功能分析来揭示油松(Pinus tabuliformis)年龄相关木材形成的转录调控网络。横截面和拉曼显微光谱分析显示,次生木质部木质化和碳水化合物沉积的增强与年龄相关,与髓比例的增加相一致。时间转录组分析发现PtARN (age- related NAC TRANSCRIPTION FACTOR)是一个关键的年龄相关调节因子,其表达是由保守的年龄计时器PtDAL1通过启动子结合直接激活的。我们对油状假单胞菌的次生细胞壁生物合成途径基因进行了全基因组鉴定,全基因组DNA亲和纯化分析发现,PtARN直接结合189个次生细胞壁生物合成基因的启动子。引人注目的是,PtARN抑制木质素生物合成抑制因子PtMYB162,形成调控级联以微调木质素化。总之,我们的工作确定了PtARN是协调油松次生木质部年龄依赖性次生细胞壁沉积和木质素化的主要调节剂,并描绘了油松中ptdal1 -PtARN介导的分子调节网络。这些发现极大地促进了我们对针叶树木材形成的分子调控网络的理解,并将发育时间与细胞壁重塑联系起来,为针叶树木材形成的研究提供了一个强有力的框架。
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引用次数: 0
MADS-Box Transcription Factors PpMADS2 and PpMADS4 Are Crucial Regulators in Climacteric Peach (Prunus persica L. Batsch) Fruit Ripening. MADS-Box转录因子PpMADS2和PpMADS4是更年期桃果实成熟的重要调控因子。
IF 6.9 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-11-01 Epub Date: 2026-07-21 DOI: 10.1111/pce.70760
Ke Fang, Yue Yang, Xiaohui Yang, Jingyi Zhang, Can Yang, Wanpeng Xi

In climacteric fruits, ripening is triggered by a shift from auto-inhibitory to auto-catalytic ethylene production, but the activation of system II autocatalytic burst remains unclear. Here, we identified two MADS-box transcription factors, PpMADS2 and PpMADS4, as key positive regulators in peach (Prunus persica L. Batsch) ripening. Their expression increased during maturation and was induced by ethylene. Overexpression in pre-ripening fruit accelerated ethylene production, colour change, sugar accumulation and softening, while silencing delayed these processes. PpMADS2 interacts with PpMADS4 to form a functional complex which potentiates their activity, and they act by directly binding to and activating the promoters of ethylene biosynthetic genes PpACS1 and PpACO1, thereby promoting peach ethylene biosynthesis. Conversely, synthesis of ethylene in turn promotes the expression of PpMADS2/4 for positive feedback, amplifying ethylene production, contributing to the system II autocatalytic burst, ultimately leading to the maturation of peach fruit. This study provides a new insight into the MADS-box-ethylene regulatory network controlling climacteric fruit ripening.

在更年期水果中,成熟是由自抑制到自催化乙烯生产的转变触发的,但系统II自催化爆发的激活尚不清楚。本研究发现,两个MADS-box转录因子PpMADS2和PpMADS4是桃成熟过程中的关键正调控因子。它们的表达在成熟过程中增加,并受到乙烯的诱导。在成熟前的果实中,过表达加速了乙烯的产生、颜色变化、糖的积累和软化,而沉默则延迟了这些过程。PpMADS2与PpMADS4相互作用形成功能复合物,增强其活性,它们直接结合并激活乙烯生物合成基因PpACS1和PpACO1的启动子,从而促进桃子乙烯的生物合成。相反,乙烯的合成反过来促进PpMADS2/4的正反馈表达,放大乙烯的产生,促进系统II自催化爆发,最终导致桃果成熟。本研究为研究mads -box-乙烯调控网络调控更年期果实成熟提供了新的思路。
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引用次数: 0
Trichomes in Plant Defence, Development and Metabolic Integration Under Environmental Stress. 环境胁迫下植物毛状体的防御、发育和代谢整合。
IF 6.9 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-11-01 Epub Date: 2026-07-16 DOI: 10.1111/pce.70752
Debdatta Chatterjee, Madhabi Das, Sanjib Patra, Srijib Chatterjee, Amit Roy, Arunava Mandal

Among various plant defence strategies, trichomes are tiny hair-like structures on the epidermis that aid in defence, environmental adaptation and the production of valuable secondary metabolites. This review features trichomes as frontline guards for plant survival, integrating their structural, physiological and metabolic roles in safeguarding against environmental adversity. We explore the developmental biology of trichomes, emphasising a multilayered regulatory network governed by transcriptional hierarchies, hormonal crosstalk, epigenetic remodelling and post-transcriptional modulation. Trichomes, divided into glandular and non-glandular types, function as physical shields and dynamic chemical interfaces, mediating defence against herbivores, pathogens, UV radiation and abiotic stresses such as drought and heavy metal exposure. Notably, glandular trichomes serve as specialised biosynthetic centres, producing high-value secondary metabolites, such as terpenoids, alkaloids and phenolics, which are increasingly harnessed in sustainable agriculture and green biotechnologies. Considering the broader context of climate resilience and bioeconomic innovation, this review describes trichomes as multifunctional and evolvable units of plant adaptation. It also highlights emerging research avenues such as single-cell omics, chromatin dynamics, metabolic and genetic engineering, which offer promising strategies for exploiting trichomes as a foundation for next-generation crop improvement and sustainable metabolic engineering.

在各种植物防御策略中,毛状体是表皮上微小的毛发状结构,有助于防御、环境适应和产生有价值的次生代谢物。本文综述了毛状体作为植物生存的前线卫士,整合了其结构、生理和代谢作用,以抵御环境逆境。我们探索毛状体的发育生物学,强调由转录等级、激素串扰、表观遗传重塑和转录后调节控制的多层调控网络。毛状体分为腺型和非腺型,作为物理屏障和动态化学界面,介导对食草动物、病原体、紫外线辐射和干旱和重金属暴露等非生物胁迫的防御。值得注意的是,腺状毛状体作为专门的生物合成中心,产生高价值的次生代谢物,如萜类、生物碱和酚类物质,这些物质越来越多地用于可持续农业和绿色生物技术。考虑到气候适应能力和生物经济创新的更广泛背景,本文将毛状体描述为植物适应的多功能和进化单位。它还强调了新兴的研究途径,如单细胞组学,染色质动力学,代谢和基因工程,为利用毛状体作为下一代作物改良和可持续代谢工程的基础提供了有前途的策略。
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引用次数: 0
Daily Heat Stress Induces Donor-Side Limitation of PSI Via Downregulation of the Cyt b6f Complex. 每日热应激通过下调Cyt b6f复合物诱导供体侧PSI限制。
IF 6.9 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-11-01 Epub Date: 2026-07-08 DOI: 10.1111/pce.70730
Laura Laihonen, Tutta Tomberg, Linda Vuorijoki, Lauri Nikkanen, Paula Mulo, Marjaana Rantala

The rapidly warming climate is driving increasingly frequent and intense heat waves worldwide, posing major challenges to plant metabolism and growth. Despite the central role of photosynthesis in plant growth, the effects of prolonged heat stress on the primary reactions of photosynthesis remain poorly understood. Here, we studied how long-term heat exposure affects growth and photosynthetic performance in the model plant Arabidopsis thaliana. Plants were exposed daily to high temperature (38°C) for 4 h throughout the growth period. Conflicting to earlier studies, we show that PSII-LHCII remain relatively intact under prolonged heat despite slightly reduced ∆F/Fm', relative electron transfer rate (rETRII) and proportion of open reaction centers (qL). Strikingly, the content of the Cytochrome b6f complex, which mediates electron transfer between the photosystems, was reduced by 30-40%. This leads to more oxidized downstream electron acceptors and prevents PSI over-reduction in conditions where carbon assimilation is inhibited.

快速变暖的气候正在推动全球范围内日益频繁和强烈的热浪,对植物的新陈代谢和生长构成重大挑战。尽管光合作用在植物生长中起着核心作用,但长期热胁迫对光合作用主要反应的影响仍然知之甚少。在这里,我们研究了长期热暴露如何影响模式植物拟南芥的生长和光合性能。在整个生育期,植物每天暴露在高温(38°C)下4小时。与之前的研究相反,我们发现PSII-LHCII在长时间加热下保持相对完整,尽管∆F/Fm’、相对电子转移速率(rETRII)和开放反应中心比例(qL)略有降低。引人注目的是,介导光系统之间电子传递的细胞色素b6f复合物的含量减少了30-40%。这导致更多的下游电子受体被氧化,并防止PSI在碳同化被抑制的条件下过度还原。
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引用次数: 0
Correction to "Genomic and Functional Insights Into Bacillus cereus SH-10 for Mitigating Lead Stress in Soybean". 更正“蜡样芽孢杆菌SH-10缓解大豆铅胁迫的基因组和功能见解”。
IF 6.9 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-11-01 Epub Date: 2026-07-23 DOI: 10.1111/pce.70770
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引用次数: 0
Endophytic Fungus Clonostachys chloroleuca Cc620: Enhance Broad-Spectrum Antifungal Resistance and Resilience in Wheat. 内生真菌cloonostachys chloroleuca Cc620:增强小麦的广谱抗真菌性和抗逆性。
IF 6.9 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-11-01 Epub Date: 2026-07-08 DOI: 10.1111/pce.70713
Huimin Xu, Guijun Liu
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引用次数: 0
Coordinated Action of TjSPL7 and TjNF-YB3 Breaks Seed Dormancy by Rebalancing ABA-JA Levels and Modulating Downstream Signalling in Tilia japonica. TjSPL7和tjf - yb3的协同作用通过重新平衡ABA-JA水平和调节下游信号来打破粳稻种子休眠。
IF 6.9 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-11-01 Epub Date: 2026-07-12 DOI: 10.1111/pce.70728
Lei Liu, Xuri Hao, Rui Zhang, Haoyu Li, Yisen Zhang, Ying Hu, Yu Chen, Yuepeng Song
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引用次数: 0
The Plant Hippo Pathway: An Evolved Hub for Strategic Resource Allocation Governing Growth-Defence-Reproduction Trade-Offs. 植物河马途径:管理生长-防御-繁殖权衡的战略性资源分配的进化中心。
IF 6.9 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-11-01 Epub Date: 2026-07-14 DOI: 10.1111/pce.70739
Yulan Shi, Lizhe An, Xian Xue

For sessile plants, survival hinges on the dynamic allocation of limited resources among growth, defence and reproduction. We propose that the plant Hippo signalling network has evolved into a central strategic hub governing these fundamental trade-offs. Building upon its evolutionarily conserved pleiotropic roles, this hub in plants has acquired unique regulatory capacities. It integrates hormonal, developmental and stress signals to act as a cellular decision-maker, exhibiting organizational complexity that includes parallel branches and context-specific outputs. Plant-specific innovations-including a direct SIK1-MOB1 interaction that bypasses the canonical SAV1 scaffold, dual-specificity NDR kinases and MOB1A/B heterodimer formation-underpin this adaptive evolution. Crucially, the antagonism between SIK1 and MOB1 fine-tunes the jasmonate pathway, functioning as a molecular 'rheostat' for the growth-defence balance. Viewing the plant Hippo pathway through the lens of 'adaptive trade-off management' not only redefines its biological significance but also charts a new research agenda. We outline priorities to quantify signal flux through the hub, resolve the structure of plant-specific complexes and manipulate this decision-making system to engineer crops with optimized resilience and yield.

对无根植物来说,生存取决于有限资源在生长、防御和繁殖之间的动态分配。我们认为,植物河马信号网络已经进化成一个管理这些基本权衡的中央战略枢纽。基于其在进化上保守的多效性作用,该中枢在植物中获得了独特的调控能力。它整合了激素、发育和压力信号,作为细胞决策者,表现出包括平行分支和特定环境输出的组织复杂性。植物特异性的创新——包括直接的SIK1-MOB1相互作用,绕过典型的SAV1支架,双特异性NDR激酶和MOB1A/B异源二聚体的形成——支持了这种适应性进化。至关重要的是,SIK1和MOB1之间的拮抗作用微调了茉莉酸通路,作为生长-防御平衡的分子“变阻器”发挥作用。通过“适应性权衡管理”的视角来看待植物的Hippo通路,不仅重新定义了它的生物学意义,而且还绘制了一个新的研究议程。我们概述了量化通过枢纽的信号通量的优先事项,解决植物特异性复合物的结构,并操纵该决策系统来设计具有优化弹性和产量的作物。
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引用次数: 0
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