Challenges associated with lithium dendrite growth and the formation of dead lithium significantly limit the achievable energy density of lithium metal batteries (LMBs), particularly under high operating current densities. Our innovative design employs a state-of-the-art 2500 separator featuring a meticulously engineered cellulose acetate (CA) coating (CA@2500) to suppress dendrite nucleation and propagation. The CO functional groups in CA enhances charge transfer kinetics and triggering the decomposition of lithium bis(trifluoromethanesulfonyl)imide (LiTFSI), which leads to the formation of a more robust solid electrolyte interphase (SEI) composed primarily of LiF. Moreover, the introduction of polar functional groups in the CA enhances the separator's hydrophilic properties, facilitating the uniform Li+ flux and creating a conductive pathway for efficient lithium migration. As a result, the CA@2500 separator exhibits a high lithium-ion transfer number (0.88) and conductivity. The lithium symmetric cell assembles with the CA@2500 separator displays a stable cycling performance over 5500 h at a current density and capacity of 10 mA cm-2 and 10 mAh cm-2, respectively. Additionally, LPF battery with CA@2500 separator shows an excellent capacity retention at 0.2 C with an average decay of 0.055 % per cycle. Moreover, a high capacity of 105 mAh g-1 is maintained after 500 cycles at 5 C with an average decay of only 0.027 % per cycle. This work achieved high stability of LMBs through simplified engineering.
{"title":"Separator engineering: Assisting lithium salt dissociation and constructing LiF-rich solid electrolyte interphases for high-rate lithium metal batteries.","authors":"Changyong Zhao, Hanyan Wu, Xuejie Gao, Chen Cheng, Shuiping Cai, Xiaofei Yang, Runcang Sun","doi":"10.1016/j.jcis.2024.08.151","DOIUrl":"10.1016/j.jcis.2024.08.151","url":null,"abstract":"<p><p>Challenges associated with lithium dendrite growth and the formation of dead lithium significantly limit the achievable energy density of lithium metal batteries (LMBs), particularly under high operating current densities. Our innovative design employs a state-of-the-art 2500 separator featuring a meticulously engineered cellulose acetate (CA) coating (CA@2500) to suppress dendrite nucleation and propagation. The CO functional groups in CA enhances charge transfer kinetics and triggering the decomposition of lithium bis(trifluoromethanesulfonyl)imide (LiTFSI), which leads to the formation of a more robust solid electrolyte interphase (SEI) composed primarily of LiF. Moreover, the introduction of polar functional groups in the CA enhances the separator's hydrophilic properties, facilitating the uniform Li<sup>+</sup> flux and creating a conductive pathway for efficient lithium migration. As a result, the CA@2500 separator exhibits a high lithium-ion transfer number (0.88) and conductivity. The lithium symmetric cell assembles with the CA@2500 separator displays a stable cycling performance over 5500 h at a current density and capacity of 10 mA cm<sup>-2</sup> and 10 mAh cm<sup>-2</sup>, respectively. Additionally, LPF battery with CA@2500 separator shows an excellent capacity retention at 0.2 C with an average decay of 0.055 % per cycle. Moreover, a high capacity of 105 mAh g<sup>-1</sup> is maintained after 500 cycles at 5 C with an average decay of only 0.027 % per cycle. This work achieved high stability of LMBs through simplified engineering.</p>","PeriodicalId":351,"journal":{"name":"Journal of Colloid and Interface Science","volume":null,"pages":null},"PeriodicalIF":9.4,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142054504","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Designing inexpensive, high-efficiency and durable bifunctional catalysts for urea oxidation reaction (UOR) and hydrogen evolution reaction (HER) is an encouraging tactic to produce hydrogen with reduced energy expenditure. Herein, oxygen vacancy-rich cobalt hydroxide/aluminum oxyhydroxide heterostructure on nickel foam (denoted as Co(OH)2/AlOOH/NF-100) has been fabricated using one step hydrothermal process. Theoretical calculation and experimental results indicate the electrons transfer from Co(OH)2 to highly active AlOOH results in the interfacial charge redistribution and optimization of electronic structure. Abundant oxygen vacancies in the heterostructure could improve the conductivity and simultaneously serve as the active sites for catalytic reaction. Consequently, the optimal Co(OH)2/AlOOH/NF-100 demonstrates excellent electrocatalytic performance for HER (62.9 mV@10 mA cm-2) and UOR (1.36 V@10 mA cm-2) due to the synergy between heterointerface and oxygen vacancies. Additionally, the in situ electrochemical impedance spectrum (EIS) for UOR suggests that the heterostructured catalyst exhibits rapid reaction kinetics, mass transfer and current response. Importantly, the urea-assisted electrolysis composed of the Co(OH)2/AlOOH/NF-100 manifests a low cell voltage (1.48 V @ 10 mA cm-2) in 1 M KOH containing 0.5 M urea. This work presents a promising avenue to the development of HER/UOR bifunctional electrocatalysts.
设计用于尿素氧化反应(UOR)和氢气进化反应(HER)的廉价、高效、耐用的双功能催化剂,是减少能源消耗生产氢气的一个令人鼓舞的策略。在此,我们采用一步水热法在泡沫镍上制备了富氧空位氢氧化钴/氧氢氧化铝异质结构(记为 Co(OH)2/AlOOH/NF-100)。理论计算和实验结果表明,电子从 Co(OH)2 转移到高活性的 AlOOH 会导致界面电荷的重新分配和电子结构的优化。异质结构中丰富的氧空位可以提高导电性,同时成为催化反应的活性位点。因此,由于异质界面和氧空位之间的协同作用,最佳的 Co(OH)2/AlOOH/NF-100 对 HER(62.9 mV@10 mA cm-2)和 UOR(1.36 V@10 mA cm-2)具有优异的电催化性能。此外,UOR 的原位电化学阻抗谱(EIS)表明,异质结构催化剂具有快速的反应动力学、传质和电流响应。重要的是,由 Co(OH)2/AlOOH/NF-100 组成的尿素辅助电解在含有 0.5 M 尿素的 1 M KOH 中表现出较低的电池电压(1.48 V @ 10 mA cm-2)。这项工作为开发 HER/UOR 双功能电催化剂提供了一条前景广阔的途径。
{"title":"Synergistic engineering of heterostructure and oxygen vacancy in cobalt hydroxide/aluminum oxyhydroxide as bifunctional electrocatalysts for urea-assisted hydrogen production.","authors":"Minglei Yan, Junjie Zhang, Cong Wang, Lang Gao, Wengang Liu, Jiahao Zhang, Chunquan Liu, Zhiwei Lu, Lijun Yang, Chenglu Jiang, Yang Zhao","doi":"10.1016/j.jcis.2024.07.239","DOIUrl":"10.1016/j.jcis.2024.07.239","url":null,"abstract":"<p><p>Designing inexpensive, high-efficiency and durable bifunctional catalysts for urea oxidation reaction (UOR) and hydrogen evolution reaction (HER) is an encouraging tactic to produce hydrogen with reduced energy expenditure. Herein, oxygen vacancy-rich cobalt hydroxide/aluminum oxyhydroxide heterostructure on nickel foam (denoted as Co(OH)<sub>2</sub>/AlOOH/NF-100) has been fabricated using one step hydrothermal process. Theoretical calculation and experimental results indicate the electrons transfer from Co(OH)<sub>2</sub> to highly active AlOOH results in the interfacial charge redistribution and optimization of electronic structure. Abundant oxygen vacancies in the heterostructure could improve the conductivity and simultaneously serve as the active sites for catalytic reaction. Consequently, the optimal Co(OH)<sub>2</sub>/AlOOH/NF-100 demonstrates excellent electrocatalytic performance for HER (62.9 mV@10 mA cm<sup>-2</sup>) and UOR (1.36 V@10 mA cm<sup>-2</sup>) due to the synergy between heterointerface and oxygen vacancies. Additionally, the in situ electrochemical impedance spectrum (EIS) for UOR suggests that the heterostructured catalyst exhibits rapid reaction kinetics, mass transfer and current response. Importantly, the urea-assisted electrolysis composed of the Co(OH)<sub>2</sub>/AlOOH/NF-100 manifests a low cell voltage (1.48 V @ 10 mA cm<sup>-2</sup>) in 1 M KOH containing 0.5 M urea. This work presents a promising avenue to the development of HER/UOR bifunctional electrocatalysts.</p>","PeriodicalId":351,"journal":{"name":"Journal of Colloid and Interface Science","volume":null,"pages":null},"PeriodicalIF":9.4,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141974680","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-05Epub Date: 2024-07-29DOI: 10.1002/jcc.27459
Kai Yuan, Shuai Zhou, Ning Li, Tianyan Li, Bowen Ding, Danhuai Guo, Yingjin Ma
Easy and effective usage of computational resources is crucial for scientific calculations. Following our recent work of machine-learning (ML) assisted scheduling optimization [J. Comput. Chem. 2023, 44, 1174], we further propose (1) the improved ML models for the better predictions of computational loads, and as such, more elaborate load-balancing calculations can be expected; (2) the idea of coded computation, that is, the integration of gradient coding, in order to introduce fault tolerance during the distributed calculations; and (3) their applications together with re-normalized exciton model with time-dependent density functional theory (REM-TDDFT) for calculating the excited states. Illustrated benchmark calculations include P38 protein, and solvent model with one or several excitable centers. The results show that the improved ML-assisted coded calculations can further improve the load-balancing and cluster utilization, owing primarily profit in fault tolerance that aims at the automated quantum chemical calculations for both ground and excited states.
轻松有效地利用计算资源对科学计算至关重要。继我们最近的机器学习(ML)辅助调度优化工作[J. Comput. Chem.2023, 44, 1174]之后,我们进一步提出:(1)改进的 ML 模型可更好地预测计算负荷,因此可望进行更精细的负荷均衡计算;(2)编码计算的理念,即梯度编码的整合,以便在分布式计算中引入容错;以及(3)它们与重归一化激子模型和时变密度泛函理论(REM-TDDFT)一起应用于计算激发态。示例基准计算包括 P38 蛋白和具有一个或多个可激发中心的溶剂模型。结果表明,改进的 ML 辅助编码计算能进一步提高负载平衡和集群利用率,这主要归功于针对基态和激发态自动量子化学计算的容错能力。
{"title":"Fault-tolerant quantum chemical calculations with improved machine-learning models.","authors":"Kai Yuan, Shuai Zhou, Ning Li, Tianyan Li, Bowen Ding, Danhuai Guo, Yingjin Ma","doi":"10.1002/jcc.27459","DOIUrl":"10.1002/jcc.27459","url":null,"abstract":"<p><p>Easy and effective usage of computational resources is crucial for scientific calculations. Following our recent work of machine-learning (ML) assisted scheduling optimization [J. Comput. Chem. 2023, 44, 1174], we further propose (1) the improved ML models for the better predictions of computational loads, and as such, more elaborate load-balancing calculations can be expected; (2) the idea of coded computation, that is, the integration of gradient coding, in order to introduce fault tolerance during the distributed calculations; and (3) their applications together with re-normalized exciton model with time-dependent density functional theory (REM-TDDFT) for calculating the excited states. Illustrated benchmark calculations include P38 protein, and solvent model with one or several excitable centers. The results show that the improved ML-assisted coded calculations can further improve the load-balancing and cluster utilization, owing primarily profit in fault tolerance that aims at the automated quantum chemical calculations for both ground and excited states.</p>","PeriodicalId":188,"journal":{"name":"Journal of Computational Chemistry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141786630","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Recently tetraspanin CD151 has been identified as an important biological target involved in metastatic processes which include cell adhesion, tumor progression processes, and so forth in different types of cancers, such as breast cancer and glioblastoma. This in Silico study considered 1603 compounds from the Food and Drug Administration database, after performing an ADMET analysis; we selected 853 ligands, which were used for docking analysis. The most promising ligands were selected from docking studies, based on two criteria: (a) showed lowest affinity to the CD151 protein and (b) they interact with the QRD motif, located in the second extracellular loop. Furthermore, we investigate the stability of the protein-ligand complexes through MD simulations as well as free energy MM-PBSA calculations. From these results, loperamide and glipizide were identified as the best evaluated drugs. We suggest an in vitro analysis is needed to confirm our in silico prediction studies.
{"title":"In silico study suggests potential drugs that target CD151 to treat breast cancer and glioblastoma.","authors":"Gema Ramírez-Salinas, Martha Cecilia Rosales-Hernandéz, José Correa-Basurto, Issac Guerrero-González, Selene Saraí Hernández-Castro, Marlet Martinez-Archundia","doi":"10.1002/jcc.27439","DOIUrl":"10.1002/jcc.27439","url":null,"abstract":"<p><p>Recently tetraspanin CD151 has been identified as an important biological target involved in metastatic processes which include cell adhesion, tumor progression processes, and so forth in different types of cancers, such as breast cancer and glioblastoma. This in Silico study considered 1603 compounds from the Food and Drug Administration database, after performing an ADMET analysis; we selected 853 ligands, which were used for docking analysis. The most promising ligands were selected from docking studies, based on two criteria: (a) showed lowest affinity to the CD151 protein and (b) they interact with the QRD motif, located in the second extracellular loop. Furthermore, we investigate the stability of the protein-ligand complexes through MD simulations as well as free energy MM-PBSA calculations. From these results, loperamide and glipizide were identified as the best evaluated drugs. We suggest an in vitro analysis is needed to confirm our in silico prediction studies.</p>","PeriodicalId":188,"journal":{"name":"Journal of Computational Chemistry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141854280","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-05Epub Date: 2024-07-23DOI: 10.1002/jcc.27467
Hejing Sun
Development of organic nonlinear optical materials has become progressively more important due to their emerging applications in new-generation photonic devices. A novel series of chromophores based on innovative thiophene and furan-fused cyclopentadienyl bridge with various powerful donor and acceptor moieties were designed and theoretically investigated for applications in nonlinear optics. To unravel the structure-property relationship between this new push-pull conjugated systems and their nonlinear optical property, multiple methods, including density of states analysis, coupled perturbed Kohn-Sham (CPKS) method, sum-over-states (SOS) model, the two-level model (TSM), hyperpolarizability density analysis, and the (hyper)polarizability contribution decomposition, were performed to comprehensively investigated the nonlinear optical and electronic properties of this new π-system. Due to excellent charge transfer ability of new bridge and distinctive structure of donor and acceptor, the designed chromophores exhibit deep HOMO levels, low excitation energy, high dipole moment difference and large hyperpolarizability, indicating the appealing air-stable property and remarkable electrooptic performance of them. Importantly, THQ-CS-A3 and PA-CS-A3 shows outstanding NLO response properties with βtot value of 6953.9 × 10-30 and 5066.0 × 10-30 esu in AN, respectively. The influence of the push-pull strength, the heterocycle and the π-conjugation of new bridge on the nonlinear optical properties of this novel powerful systems are clarified. This new series of chromophores exhibit remarkable electro-optical Pockels and optical rectification effect. More interestingly, PA-CS-A3 and THQ-CS-A2 also show appealing SHG effect. This study will help people understand the nature of nonlinear optical properties of innovative heteroarene-fused based cyclopentadienyl chromophores and offer guidance for the rational design of chromophores with outstanding electrooptic (EO) performance in the future.
{"title":"Unraveling the structure-property relationship of novel thiophene and furan-fused cyclopentadienyl chromophores for nonlinear optical applications.","authors":"Hejing Sun","doi":"10.1002/jcc.27467","DOIUrl":"10.1002/jcc.27467","url":null,"abstract":"<p><p>Development of organic nonlinear optical materials has become progressively more important due to their emerging applications in new-generation photonic devices. A novel series of chromophores based on innovative thiophene and furan-fused cyclopentadienyl bridge with various powerful donor and acceptor moieties were designed and theoretically investigated for applications in nonlinear optics. To unravel the structure-property relationship between this new push-pull conjugated systems and their nonlinear optical property, multiple methods, including density of states analysis, coupled perturbed Kohn-Sham (CPKS) method, sum-over-states (SOS) model, the two-level model (TSM), hyperpolarizability density analysis, and the (hyper)polarizability contribution decomposition, were performed to comprehensively investigated the nonlinear optical and electronic properties of this new π-system. Due to excellent charge transfer ability of new bridge and distinctive structure of donor and acceptor, the designed chromophores exhibit deep HOMO levels, low excitation energy, high dipole moment difference and large hyperpolarizability, indicating the appealing air-stable property and remarkable electrooptic performance of them. Importantly, THQ-CS-A3 and PA-CS-A3 shows outstanding NLO response properties with β<sub>tot</sub> value of 6953.9 × 10<sup>-30</sup> and 5066.0 × 10<sup>-30</sup> esu in AN, respectively. The influence of the push-pull strength, the heterocycle and the π-conjugation of new bridge on the nonlinear optical properties of this novel powerful systems are clarified. This new series of chromophores exhibit remarkable electro-optical Pockels and optical rectification effect. More interestingly, PA-CS-A3 and THQ-CS-A2 also show appealing SHG effect. This study will help people understand the nature of nonlinear optical properties of innovative heteroarene-fused based cyclopentadienyl chromophores and offer guidance for the rational design of chromophores with outstanding electrooptic (EO) performance in the future.</p>","PeriodicalId":188,"journal":{"name":"Journal of Computational Chemistry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141750662","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-05Epub Date: 2024-07-17DOI: 10.1002/jcc.27466
Jewel Hossen, Naoki Nakatani
Chlorine is an important chemical which has long been produced in chlor-alkali process using dimensionally stable anodes (DSA). However, some serious drawbacks of DSA inspire the development of alternative anodes for chlorine evolution reaction (CER). In this study, we focused on the graphene- and carbon nanotube-supported platinum tetra-phenyl porphyrins as electrocatalysts for CER, which have been theoretically investigated based on density functional theory. Our results reveal that the supported substrates possess potential CER electrocatalytic activity with very low thermodynamic overpotentials (0.012-0.028 V) via Cl* pathway instead of ClO*. The electronic structures analyses showed that electron transfer from the support to the adsorbed chlorine via the Pt center leads to strong Pt-Cl interactions. Furthermore, the supported electrocatalysts exhibited excellent selectivity toward CER because of high overpotentials and reaction barriers of oxygen evolution process. Therefore, our results may pave the way for designing CER electrocatalyst utilizing emerging carbon nanomaterials.
{"title":"Theoretical study on the carbon nanomaterial-supported Pt complex electrocatalysts for efficient and selective chlorine evolution reaction.","authors":"Jewel Hossen, Naoki Nakatani","doi":"10.1002/jcc.27466","DOIUrl":"10.1002/jcc.27466","url":null,"abstract":"<p><p>Chlorine is an important chemical which has long been produced in chlor-alkali process using dimensionally stable anodes (DSA). However, some serious drawbacks of DSA inspire the development of alternative anodes for chlorine evolution reaction (CER). In this study, we focused on the graphene- and carbon nanotube-supported platinum tetra-phenyl porphyrins as electrocatalysts for CER, which have been theoretically investigated based on density functional theory. Our results reveal that the supported substrates possess potential CER electrocatalytic activity with very low thermodynamic overpotentials (0.012-0.028 V) via Cl* pathway instead of ClO*. The electronic structures analyses showed that electron transfer from the support to the adsorbed chlorine via the Pt center leads to strong Pt-Cl interactions. Furthermore, the supported electrocatalysts exhibited excellent selectivity toward CER because of high overpotentials and reaction barriers of oxygen evolution process. Therefore, our results may pave the way for designing CER electrocatalyst utilizing emerging carbon nanomaterials.</p>","PeriodicalId":188,"journal":{"name":"Journal of Computational Chemistry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141625525","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The two-dimensional (2D) monolayer material MoSi2N4 was successfully synthesized in 2020[Hong et al., Science 369, 670, (2020)], exhibiting a plethora of new phenomena and unusual properties, with good stability at room temperature. However, MA2Z4 family monolayer materials involve primarily transition metal substitutions for M atoms. In order to address the research gap on lanthanide and actinide MA2Z4 materials, this work conducts electronic structure calculations on novel 2D MSi2N4 (M = La, Eu) monolayer materials by employing first-principles methods and CASTEP. High carrier mobility is discovered in the indirect bandgap semiconductor 2D LaSi2N4 monolayer (~5400 cm2 V-1 s-1) and in the spin (spin-down channel) carrier mobility of the half-metallic ferromagnetic EuSi2N4 monolayer (~2800 cm2 V-1 s-1). EuSi2N4 monolayer supplements research on spin carrier mobility in half-metallic ferromagnetic monolayer materials at room temperature and possesses a magnetic moment of 5 μB, which should not be underestimated. Furthermore, due to the unique electronic band structure of EuSi2N4 monolayer (with the spin-up channel exhibiting metallic properties and the spin-down channel exhibiting semiconductor properties), it demonstrates a 100% spin polarization rate, presenting significant potential applications in fields such as magnetic storage, magnetic sensing, and spintronics.
{"title":"The high electron mobility for spin-down channel of two-dimensional spin-polarized half-metallic ferromagnetic EuSi<sub>2</sub>N<sub>4</sub> monolayer.","authors":"Bo Zhang, Huai-Qian Wang, Hui-Fang Li, Hao Zheng, Yong-Hang Zhang, Xun-Jie Mei, Jia-Ming Zhang, Kai-Le Jiang, Qing-Wei Jiang","doi":"10.1002/jcc.27474","DOIUrl":"10.1002/jcc.27474","url":null,"abstract":"<p><p>The two-dimensional (2D) monolayer material MoSi<sub>2</sub>N<sub>4</sub> was successfully synthesized in 2020[Hong et al., Science 369, 670, (2020)], exhibiting a plethora of new phenomena and unusual properties, with good stability at room temperature. However, MA<sub>2</sub>Z<sub>4</sub> family monolayer materials involve primarily transition metal substitutions for M atoms. In order to address the research gap on lanthanide and actinide MA<sub>2</sub>Z<sub>4</sub> materials, this work conducts electronic structure calculations on novel 2D MSi<sub>2</sub>N<sub>4</sub> (M = La, Eu) monolayer materials by employing first-principles methods and CASTEP. High carrier mobility is discovered in the indirect bandgap semiconductor 2D LaSi<sub>2</sub>N<sub>4</sub> monolayer (~5400 cm<sup>2</sup> V<sup>-1</sup> s<sup>-1</sup>) and in the spin (spin-down channel) carrier mobility of the half-metallic ferromagnetic EuSi<sub>2</sub>N<sub>4</sub> monolayer (~2800 cm<sup>2</sup> V<sup>-1</sup> s<sup>-1</sup>). EuSi<sub>2</sub>N<sub>4</sub> monolayer supplements research on spin carrier mobility in half-metallic ferromagnetic monolayer materials at room temperature and possesses a magnetic moment of 5 μ<sub>B</sub>, which should not be underestimated. Furthermore, due to the unique electronic band structure of EuSi<sub>2</sub>N<sub>4</sub> monolayer (with the spin-up channel exhibiting metallic properties and the spin-down channel exhibiting semiconductor properties), it demonstrates a 100% spin polarization rate, presenting significant potential applications in fields such as magnetic storage, magnetic sensing, and spintronics.</p>","PeriodicalId":188,"journal":{"name":"Journal of Computational Chemistry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141970208","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-05Epub Date: 2024-07-29DOI: 10.1002/jcc.27469
Songhyeon Kim, Hyunsu Bong, Minji Jeon
Using embedding methods, compounds with similar properties will be closely located in latent space, and these embedding vectors can be used to find other compounds with similar properties based on the distance between compounds. However, they often require computational resources and programming skills. Here we develop Dr.Emb Appyter, a user-friendly web-based chemical compound search platform for drug discovery without any technical barriers. It uses embedding vectors to identify compounds similar to a given query in the embedding space. Dr.Emb Appyter provides various types of embedding methods, such as fingerprinting, SMILES, and transcriptional response-based methods, and embeds numerous compounds using them. The Faiss-based search system efficiently finds the closest compounds of query in the library. Additionally, Dr.Emb Appyter offers information on the top compounds; visualizes the results with 3D scatter plots, heatmaps, and UpSet plots; and analyses the results using a drug-set enrichment analysis. Dr.Emb Appyter is freely available at https://dremb.korea.ac.kr.
{"title":"Dr.Emb Appyter: A web platform for drug discovery using embedding vectors.","authors":"Songhyeon Kim, Hyunsu Bong, Minji Jeon","doi":"10.1002/jcc.27469","DOIUrl":"10.1002/jcc.27469","url":null,"abstract":"<p><p>Using embedding methods, compounds with similar properties will be closely located in latent space, and these embedding vectors can be used to find other compounds with similar properties based on the distance between compounds. However, they often require computational resources and programming skills. Here we develop Dr.Emb Appyter, a user-friendly web-based chemical compound search platform for drug discovery without any technical barriers. It uses embedding vectors to identify compounds similar to a given query in the embedding space. Dr.Emb Appyter provides various types of embedding methods, such as fingerprinting, SMILES, and transcriptional response-based methods, and embeds numerous compounds using them. The Faiss-based search system efficiently finds the closest compounds of query in the library. Additionally, Dr.Emb Appyter offers information on the top compounds; visualizes the results with 3D scatter plots, heatmaps, and UpSet plots; and analyses the results using a drug-set enrichment analysis. Dr.Emb Appyter is freely available at https://dremb.korea.ac.kr.</p>","PeriodicalId":188,"journal":{"name":"Journal of Computational Chemistry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141786629","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-08-29DOI: 10.1016/j.talanta.2024.126779
Yayun Yang, Nan Zhang, Wei Jiang
Sensitive monitoring of human 8-oxyguanine DNA glycosylase (hOGG1) activity in living cells is helpful to understand its function in damage repair and evaluate its role in disease diagnosis. Herein, a functional DNA-Zn2+ coordination nanospheres was proposed for sensitive imaging of hOGG1 in living cells. The nanospheres were constructed through the coordination-driven self-assembly of the entropy driven reaction (EDR) -deoxyribozyme (DNAzyme) system with Zn2+, where DNAzyme was designed to split structure and assembled into the EDR system. When the nanospheres entered the cell, the competitive coordination between phosphate in the cell and Zn2+ leaded to the disintegration of the nanospheres, releasing DNA and some Zn2+. The released Zn2+ acted as a cofactor of DNAzyme. In the presence of hOGG1, the EDR was completed, accompanied by fluorescence recovery and the generation of a complete DNAzyme. With the assistance of Zn2+, DNAzyme continuously cleaved substrates to produce plenty of fluorescence signals, thus achieving sensitive imaging of hOGG1 activity. The nanospheres successfully achieved sensitive imaging of hOGG1 in human cervical cancer cells (HeLa), human non-small cell lung cancer cells and human normal colonic epithelial cells, and assayed changes in hOGG1 activity in HeLa cells. This nanospheres may provide a new tool for intracellular hOGG1 imaging and related biomedical studies.
灵敏监测活细胞中人类 8-oxyguanine DNA 糖基化酶(hOGG1)的活性有助于了解其在损伤修复中的功能,并评估其在疾病诊断中的作用。本文提出了一种功能性 DNA-Zn2+ 配位纳米球,用于活细胞中 hOGG1 的灵敏成像。该纳米球是通过熵驱动反应(EDR)-脱氧核糖核酸酶(DNAzyme)系统与Zn2+的配位驱动自组装构建的,其中DNAzyme被设计成分裂结构并组装到EDR系统中。当纳米球进入细胞时,细胞中的磷酸盐和 Zn2+ 之间的竞争性配位导致纳米球解体,释放出 DNA 和一些 Zn2+。释放出的 Zn2+ 成为 DNA 酶的辅助因子。在 hOGG1 的存在下,EDR 完成,同时荧光恢复并生成完整的 DNA 酶。在 Zn2+ 的帮助下,DNA 酶不断裂解底物,产生大量荧光信号,从而实现了对 hOGG1 活性的灵敏成像。该纳米球成功实现了对人宫颈癌细胞(HeLa)、人非小细胞肺癌细胞和人正常结肠上皮细胞中 hOGG1 的灵敏成像,并检测了 HeLa 细胞中 hOGG1 活性的变化。这种纳米球可能会为细胞内 hOGG1 的成像和相关生物医学研究提供一种新的工具。
{"title":"Functional DNA-Zn<sup>2+</sup> coordination nanospheres for sensitive imaging of 8-oxyguanine DNA glycosylase activity in living cells.","authors":"Yayun Yang, Nan Zhang, Wei Jiang","doi":"10.1016/j.talanta.2024.126779","DOIUrl":"10.1016/j.talanta.2024.126779","url":null,"abstract":"<p><p>Sensitive monitoring of human 8-oxyguanine DNA glycosylase (hOGG1) activity in living cells is helpful to understand its function in damage repair and evaluate its role in disease diagnosis. Herein, a functional DNA-Zn<sup>2+</sup> coordination nanospheres was proposed for sensitive imaging of hOGG1 in living cells. The nanospheres were constructed through the coordination-driven self-assembly of the entropy driven reaction (EDR) -deoxyribozyme (DNAzyme) system with Zn<sup>2+</sup>, where DNAzyme was designed to split structure and assembled into the EDR system. When the nanospheres entered the cell, the competitive coordination between phosphate in the cell and Zn<sup>2+</sup> leaded to the disintegration of the nanospheres, releasing DNA and some Zn<sup>2+</sup>. The released Zn<sup>2+</sup> acted as a cofactor of DNAzyme. In the presence of hOGG1, the EDR was completed, accompanied by fluorescence recovery and the generation of a complete DNAzyme. With the assistance of Zn<sup>2+</sup>, DNAzyme continuously cleaved substrates to produce plenty of fluorescence signals, thus achieving sensitive imaging of hOGG1 activity. The nanospheres successfully achieved sensitive imaging of hOGG1 in human cervical cancer cells (HeLa), human non-small cell lung cancer cells and human normal colonic epithelial cells, and assayed changes in hOGG1 activity in HeLa cells. This nanospheres may provide a new tool for intracellular hOGG1 imaging and related biomedical studies.</p>","PeriodicalId":435,"journal":{"name":"Talanta","volume":null,"pages":null},"PeriodicalIF":5.6,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142103030","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-07-25DOI: 10.1016/j.jcis.2024.07.192
Yating Cui, Siyu Ji, Yujie Zhu, Jingyu Xi
The practical applications of lithium sulfur batteries (LSBs) are hindered by notorious shuttle effect and sluggish conversion kinetics of intermediate polysulfides. Herein, Mo2C-Co heterogeneous particles decorated two-dimensional (2D) carbon nanosheets grown on hollow carbon microtubes (CCC@MCC) are synthesized. Three-dimensional (3D) carbon framework with Mo2C-Co heterogeneous particles combines the conductivity, adsorption and catalysis, effectively trapping and accelerating the conversion of polysulfides. As evidenced experimentally, the hetero-structured Mo2C-Co with high Li+ diffusion coefficient enables uniform precipitation and complete oxidation of Li2S. Meanwhile, CCC@MCC is found to have multiple application possibilities for lithium-sulfur batteries. As an interlayer, the cells deliver an excellent capacity of 881.1 mAh/g at 2C and still retain 438.2 mAh/g after 500 cycles under the low temperature of 0 ℃. As a sulfur carrier, the cell with a sulfur loading of 7.0 mg cm-2 exhibits a high area capacity of 5.3 mAh cm-2. This work provides an effective strategy to prepare heterostructured material and imaginatively exploit the application potential of it.
{"title":"Mo<sub>2</sub>C-Co heterostructure with carbon nanosheets decorated carbon microtubules: Different means for high-performance lithium-sulfur batteries.","authors":"Yating Cui, Siyu Ji, Yujie Zhu, Jingyu Xi","doi":"10.1016/j.jcis.2024.07.192","DOIUrl":"10.1016/j.jcis.2024.07.192","url":null,"abstract":"<p><p>The practical applications of lithium sulfur batteries (LSBs) are hindered by notorious shuttle effect and sluggish conversion kinetics of intermediate polysulfides. Herein, Mo<sub>2</sub>C-Co heterogeneous particles decorated two-dimensional (2D) carbon nanosheets grown on hollow carbon microtubes (CCC@MCC) are synthesized. Three-dimensional (3D) carbon framework with Mo<sub>2</sub>C-Co heterogeneous particles combines the conductivity, adsorption and catalysis, effectively trapping and accelerating the conversion of polysulfides. As evidenced experimentally, the hetero-structured Mo<sub>2</sub>C-Co with high Li<sup>+</sup> diffusion coefficient enables uniform precipitation and complete oxidation of Li<sub>2</sub>S. Meanwhile, CCC@MCC is found to have multiple application possibilities for lithium-sulfur batteries. As an interlayer, the cells deliver an excellent capacity of 881.1 mAh/g at 2C and still retain 438.2 mAh/g after 500 cycles under the low temperature of 0 ℃. As a sulfur carrier, the cell with a sulfur loading of 7.0 mg cm<sup>-2</sup> exhibits a high area capacity of 5.3 mAh cm<sup>-2</sup>. This work provides an effective strategy to prepare heterostructured material and imaginatively exploit the application potential of it.</p>","PeriodicalId":351,"journal":{"name":"Journal of Colloid and Interface Science","volume":null,"pages":null},"PeriodicalIF":9.4,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141791573","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}