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Bi- and tricyclic diterpenoids: landmarks from a decade (2013-2023) in search of leads against infectious diseases. 双环和三环二萜类化合物:寻找抗传染病线索十年(2013-2023 年)的里程碑。
IF 10.2 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-07 DOI: 10.1039/d4np00021h
Olha Antoniuk, Ana Maranha, Jorge A R Salvador, Nuno Empadinhas, Vânia M Moreira

Covering: 2013 to 2023In an era where antimicrobial resistance severely threatens our ability to treat infections, the discovery of new drugs that belong to different chemical classes and/or bear original modes of action is urgently needed. In this case, diterpenoids comprise a productive field with a proven track record in providing new anti-infectives to tackle bacterial infections and malaria. This review highlights the potential of both naturally occurring and semi-synthetic bi- and tricyclic diterpenoids to become leads in search of new drugs to treat infections caused by bacteria, fungi, viruses and protozoan parasites. The literature from the last decade (2013-2023) is covered, focusing on naturally occurring and semi-synthetic bicyclic (labdanes and labdane-type) and tricyclic (all classes) diterpenoids, detailing their relevant biological activities in the context of infection, which are explained through structure-activity relationships.

覆盖时间:2013 年至 2023 年在抗菌药耐药性严重威胁我们治疗感染能力的时代,迫切需要发现属于不同化学类别和/或具有独创作用模式的新药。在这种情况下,二萜类化合物是一个富有成效的领域,在提供新的抗感染药物以应对细菌感染和疟疾方面有着良好的记录。本综述强调了天然和半合成的双环和三环二萜类化合物在寻找治疗细菌、真菌、病毒和原生动物寄生虫引起的感染的新药方面的潜力。本研究涵盖了过去十年(2013-2023 年)的文献,重点关注天然和半合成的双环(拉布丹类和拉布丹类)和三环(所有类别)二萜类化合物,详细介绍了它们在感染方面的相关生物活性,并通过结构-活性关系对这些活性进行了解释。
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引用次数: 0
Hot off the Press. 新闻热点
IF 10.2 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-04 DOI: 10.1039/d4np90043j
Robert A Hill, Andrew Sutherland

A personal selection of 32 recent papers is presented covering various aspects of current developments in bioorganic chemistry and novel natural products such as asperochone A from Aspergillus sp. MMC-2.

本书精选了 32 篇最新论文,涵盖了生物有机化学和新型天然产品(如来自曲霉 MMC-2 的 Asperochone A)当前发展的各个方面。
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引用次数: 0
Structural diversity, evolutionary origin, and metabolic engineering of plant specialized benzylisoquinoline alkaloids. 植物特化苄基异喹啉生物碱的结构多样性、进化起源和代谢工程。
IF 10.2 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-03 DOI: 10.1039/d4np00029c
Ya Tian, Lingzhe Kong, Qi Li, Yifan Wang, Yongmiao Wang, Zhoujie An, Yuwei Ma, Lixia Tian, Baozhong Duan, Wei Sun, Ranran Gao, Shilin Chen, Zhichao Xu

Covering: up to June 2024Benzylisoquinoline alkaloids (BIAs) represent a diverse class of plant specialized metabolites derived from L-tyrosine, exhibiting significant pharmacological properties such as anti-microbial, anti-spasmodic, anti-cancer, cardiovascular protection, and analgesic effects. The industrial production of valuable BIAs relies on extraction from plants; however, challenges concerning their low concentration and efficiency hinder drug development. Hence, alternative approaches, including biosynthesis and chemoenzymatic synthesis, have been explored. Model species like Papaver somniferum and Coptis japonica have played a key role in unraveling the biosynthetic pathways of BIAs; however, many aspects, particularly modified steps like oxidation and methylation, remain unclear. Critical enzymes, e.g., CYP450s and methyltransferases, play a substantial role in BIA backbone formation and modification, which is essential for understanding the origin and adaptive evolution of these plant specialized metabolites. This review comprehensively analyzes the structural diversity of reported BIAs and their distribution in plant lineages. In addition, the progress in understanding biosynthesis, evolution, and catalytic mechanisms underlying BIA biosynthesis is summarized. Finally, we discuss the progress and challenges in metabolic engineering, providing valuable insights into BIA drug development and the sustainable utilization of BIA-producing plants.

报道:截至 2024 年 6 月苄基异喹啉生物碱(BIAs)是一类从 L-酪氨酸中提取的植物专一代谢物,具有抗微生物、抗痉挛、抗癌、保护心血管和镇痛等显著药理特性。有价值的 BIAs 的工业化生产依赖于从植物中提取,但其低浓度和低效率的挑战阻碍了药物的开发。因此,人们开始探索其他方法,包括生物合成和化学合成。在揭示 BIAs 生物合成途径的过程中,木蝴蝶和日本黄连等模式物种发挥了关键作用;然而,许多方面,尤其是氧化和甲基化等修饰步骤仍不清楚。关键酶,如 CYP450s 和甲基转移酶,在 BIA 骨架的形成和修饰过程中发挥着重要作用,这对于了解这些植物特殊代谢物的起源和适应性进化至关重要。本综述全面分析了已报道的 BIAs 的结构多样性及其在植物品系中的分布。此外,还总结了在了解 BIA 生物合成、进化和催化机制方面取得的进展。最后,我们讨论了代谢工程方面的进展和挑战,为 BIA 药物开发和 BIA 生产植物的可持续利用提供了宝贵的见解。
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引用次数: 0
Isolation, biological activity, and synthesis of isoquinoline alkaloids. 异喹啉生物碱的分离、生物活性和合成。
IF 10.2 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-02 DOI: 10.1039/d4np00023d
Xiaorong Yang, Xiaolou Miao, Lixia Dai, Xiao Guo, Janar Jenis, Jiyu Zhang, Xiaofei Shang

Covering: 2019 to 2023Isoquinoline alkaloids, an important class of N-based heterocyclic compounds, have attracted considerable attention from researchers worldwide. To follow up on our prior review (covering 2014-2018) and present the progress of this class of compounds, this review summarizes and provides updated literature on novel isoquinoline alkaloids isolated during the period of 2019-2023, together with their biological activity and underlying mechanisms of action. Moreover, with the rapid development of synthetic modification strategies, the synthesis strategies of isoquinoline alkaloids have been continuously optimized, and the total synthesis of these classes of natural products is reviewed critically herein. Over 250 molecules with a broad range of bioactivities, including antitumor, antibacterial, cardioprotective, anti-inflammatory, neuroprotective and other activities, are isolated and discussed. The total synthesis of more than nine classes of isoquinoline alkaloids is presented, and thirteen compounds constitute the first total synthesis. This survey provides new indications or possibilities for the discovery of new drugs from the original naturally occurring isoquinoline alkaloids.

覆盖时间:2019 年至 2023 年异喹啉生物碱是一类重要的 N 基杂环化合物,吸引了全世界研究人员的极大关注。为了跟进我们之前的综述(涵盖 2014-2018 年)并介绍该类化合物的研究进展,本综述总结并提供了 2019-2023 年期间分离出的新型异喹啉生物碱的最新文献,以及它们的生物活性和基本作用机制。此外,随着合成修饰策略的快速发展,异喹啉生物碱的合成策略也在不断优化,本文对这一类天然产物的全合成进行了点评。本文分离并讨论了 250 多种具有广泛生物活性的分子,包括抗肿瘤、抗菌、心脏保护、抗炎、神经保护和其他活性。介绍了超过九类异喹啉生物碱的全合成,其中 13 个化合物是首次全合成。这项调查为从原始天然异喹啉生物碱中发现新药提供了新的迹象或可能性。
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引用次数: 0
Exploring nature's battlefield: organismic interactions in the discovery of bioactive natural products. 探索大自然的战场:生物活性天然产品发现过程中的有机体相互作用。
IF 10.2 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-24 DOI: 10.1039/d4np00018h
Yuyang Wang, Yan-Ni Shi, Hao Xiang, Yi-Ming Shi

Covering: up to March 2024.Microbial natural products have historically been a cornerstone for the discovery of therapeutic agents. Advanced (meta)genome sequencing technologies have revealed that microbes harbor far greater biosynthetic capabilities than previously anticipated. However, despite the application of CRISPR/Cas-based gene editing and high-throughput technologies to activate silent biosynthetic gene clusters, the rapid identification of new natural products has not led to a proportional increase in the discovery rate of lead compounds or drugs. A crucial issue in this gap may be insufficient knowledge about the inherent biological and physiological functions of microbial natural products. Addressing this gap necessitates recognizing that the generation of functional natural products is deeply rooted in the interactions between the producing microbes and other (micro)organisms within their ecological contexts, an understanding that is essential for harnessing their potential therapeutic benefits. In this review, we highlight the discovery of functional microbial natural products from diverse niches, including those associated with humans, nematodes, insects, fungi, protozoa, plants, and marine animals. Many of these findings result from an organismic-interaction-guided strategy using multi-omic approaches. The current importance of this topic lies in its potential to advance drug discovery in an era marked by increasing antimicrobial resistance.

微生物天然产物历来是发现治疗药物的基石。先进的(元)基因组测序技术发现,微生物蕴藏的生物合成能力远远超出了人们的预期。然而,尽管应用了基于 CRISPR/Cas 的基因编辑和高通量技术来激活沉默的生物合成基因簇,新天然产物的快速鉴定并没有带来先导化合物或药物发现率的成比例增长。造成这一差距的一个关键问题可能是对微生物天然产物固有的生物和生理功能认识不足。要消除这一差距,就必须认识到功能性天然产物的产生深深植根于生产微生物与生态环境中其他(微)生物之间的相互作用,而这种认识对于利用其潜在的治疗功效至关重要。在这篇综述中,我们将重点介绍从不同生态位中发现的功能性微生物天然产物,包括与人类、线虫、昆虫、真菌、原生动物、植物和海洋动物相关的天然产物。其中许多发现都是采用多组学方法,以有机体相互作用为指导的策略所取得的成果。本课题目前的重要性在于,在抗菌药耐药性不断增加的时代,它具有推动药物发现的潜力。
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引用次数: 0
Chemical case studies from natural products of recent interest in the crop protection industry 作物保护行业近期关注的天然产品化学案例研究
IF 11.9 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-19 DOI: 10.1039/d4np00035h
Georg Späth, Olivier Loiseleur
Covering: up to 2024
覆盖范围:至 2024 年
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引用次数: 0
Phytochemical and pharmacological properties of the genus Alpinia from 2016 to 2023 2016 年至 2023 年阿尔皮纳属的植物化学和药理特性。
IF 10.2 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-18 DOI: 10.1039/d4np00004h
Covering 2016 up to the end of 2023
Alpinia is the largest genus of flowering plants in the ginger family, Zingiberaceae, and comprises about 500 species. Many Alpinia are commonly cultivated ornamental plants, and some are used as spices or traditional medicine to treat inflammation, hyperlipidemia, and cancers. However, only a few comprehensive reviews have been published on the phytochemistry and pharmacology of this genus, and the latest review was published in 2017. In this review, we provide an extensive coverage of the studies on Alpinia species reported from 2016 through 2023, including newly isolated compounds and potential biological effects. The present review article shows that Alpinia species have a wide spectrum of pharmacological activities, most due to the activities of diarylheptanoids, terpenoids, flavonoids, and phenolics.
报告覆盖 2016 年至 2023 年底Alpinia 是姜科(Zingiberaceae)中最大的开花植物属,约有 500 个品种。许多金合欢属植物是常见的栽培观赏植物,有些被用作香料或治疗炎症、高脂血症和癌症的传统药物。然而,关于该属植物化学和药理学的全面综述仅发表过几篇,最新的综述发表于 2017 年。在这篇综述中,我们广泛介绍了 2016 年至 2023 年期间所报道的有关阿尔卑斯种的研究,包括新分离的化合物和潜在的生物效应。本综述文章表明,Alpinia 物种具有广泛的药理活性,其中大部分是由于二芳基庚酸类、萜类、黄酮类和酚类化合物的活性。
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引用次数: 0
Terpenoids of plants from Chloranthaceae family: chemistry, bioactivity, and synthesis† 绿茶科植物的萜类化合物:化学、生物活性和合成。
IF 10.2 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-18 DOI: 10.1039/d4np00005f
Covering: 1976 to December 2023
Chloranthaceae is comprised of four extant genera (Chloranthus, Sarcandra, Hedyosmum, and Ascarina), totaling about 80 species, many of which have been widely used as herbal medicines for diverse medical purposes. Chloranthaceae plants represent a rich source of structurally interesting and diverse secondary metabolites, with sesquiterpenoids and diterpenoids being the predominant structural types. Lindenane sesquiterpenoids and their oligomers, chemotaxonomical markers of the family Chloranthaceae, have shown a wide spectrum of bioactivities, attracting significant attention from organic chemists and pharmacologists. Recent achievements also demonstrated the research value of two unique structural types in this plant family, sesquiterpenoid–monoterpenoid heterodimers and meroterpenoids. This review systematically summarizes 682 structurally characterized terpenoids from 22 Chloranthaceae plants and their key biological activities as well as the chemical synthesis of selected terpenoids.
覆盖范围:1976 年至 2023 年 12 月1976 年 12 月至 2023 年 12 月Chloranthaceae 由四个现存属(Chloranthus、Sarcandra、Hedyosmum 和 Ascarina)组成,共有约 80 个物种,其中许多已被广泛用作草药,用于各种医疗目的。氯兰科植物是结构有趣、种类繁多的次生代谢物的丰富来源,其中倍半萜和二萜是主要的结构类型。林丹倍半萜类化合物及其低聚物是氯苋科植物的化学分类标志,具有广泛的生物活性,引起了有机化学家和药理学家的极大关注。最近的研究成果还证明了该植物家族中两种独特结构类型--倍半萜类-单萜类异构体和经络萜类--的研究价值。这篇综述系统地总结了来自 22 种植物的 682 种具有结构特征的萜类化合物及其主要生物活性,以及部分萜类化合物的化学合成。
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引用次数: 0
Unleashing the potential: type I CRISPR-Cas systems in actinomycetes for genome editing 释放潜能:放线菌中用于基因组编辑的 I 型 CRISPR-Cas 系统。
IF 10.2 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-18 DOI: 10.1039/d4np00010b
Covering: up to the end of 2023
Type I CRISPR-Cas systems are widely distributed, found in over 40% of bacteria and 80% of archaea. Among genome-sequenced actinomycetes (particularly Streptomyces spp.), 45.54% possess type I CRISPR-Cas systems. In comparison to widely used CRISPR systems like Cas9 or Cas12a, these endogenous CRISPR-Cas systems have significant advantages, including better compatibility, wide distribution, and ease of operation (since no exogenous Cas gene delivery is needed). Furthermore, type I CRISPR-Cas systems can simultaneously edit and regulate genes by adjusting the crRNA spacer length. Meanwhile, most actinomycetes are recalcitrant to genetic manipulation, hindering the discovery and engineering of natural products (NPs). The endogenous type I CRISPR-Cas systems in actinomycetes may offer a promising alternative to overcome these barriers. This review summarizes the challenges and recent advances in CRISPR-based genome engineering technologies for actinomycetes. It also presents and discusses how to establish and develop genome editing tools based on type I CRISPR-Cas systems in actinomycetes, with the aim of their future application in gene editing and the discovery of NPs in actinomycetes.
覆盖范围:截至 2023 年底I 型 CRISPR-Cas 系统分布广泛,存在于 40% 以上的细菌和 80% 的古细菌中。在基因组测序的放线菌(尤其是链霉菌属)中,45.54%拥有I型CRISPR-Cas系统。与广泛使用的CRISPR系统(如Cas9或Cas12a)相比,这些内源CRISPR-Cas系统具有显著的优势,包括兼容性更好、分布广泛、操作简便(因为不需要外源Cas基因的传递)。此外,I型CRISPR-Cas系统可以通过调整crRNA间隔长度来同时编辑和调控基因。与此同时,大多数放线菌对基因操作不敏感,阻碍了天然产物(NPs)的发现和工程化。放线菌中的内源性 I 型 CRISPR-Cas 系统可能为克服这些障碍提供了一种有前途的选择。本综述总结了放线菌基于 CRISPR 的基因组工程技术所面临的挑战和最新进展。它还介绍和讨论了如何在放线菌中建立和开发基于 I 型 CRISPR-Cas 系统的基因组编辑工具,目的是将来将其应用于放线菌的基因编辑和 NPs 的发现。
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引用次数: 0
Current and emerging tools and strategies for the identification of bioactive natural products in complex mixtures 鉴定复杂混合物中生物活性天然产品的现有和新兴工具与策略
IF 11.9 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-18 DOI: 10.1039/d4np00006d
Manon Meunier, Andreas Schinkovitz, Séverine Derbré
Covering: up to 2024
覆盖范围:至 2024 年
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引用次数: 0
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Natural Product Reports
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