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Tumor immune mechanobiology 肿瘤免疫机械生物学
IF 4.2 3区 工程技术 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-06-01 Epub Date: 2026-01-24 DOI: 10.1016/j.cobme.2026.100651
Guhan Qian , Hongrong Zhang , Christopher D. Zahm , Paolo P. Provenzano
Tumor microenvironments (TMEs) are not only biochemically complex niches but also mechanically dynamic landscapes that profoundly shape transformed, stromal, and immune cell behavior. This review presents established and emerging insights into the mechanobiology of the stroma and immune cells, particularly cytotoxic T cells, that are extremely promising candidates for anti-tumor immunotherapy. We discuss how complex stromal dynamics and stromal targeting therapies (i.e., antifibrotic, mechanotransduction, and targeting physical properties of the tumor) can enhance immune infiltration and increase susceptibility to immunotherapies. Likewise, mechanical TME features such as stiffness, viscoelasticity, and ECM alignment directly influence T cell infiltration and function through mechanotransduction pathways, including YAP, Rho, and integrin signaling, which can be manipulated to enhance T cell function in solid tumors. We additionally highlight emerging needs to capture spatiotemporal information that are essential for developing design criteria for next-generation “physically optimized” immunotherapies for solid tumor environments.
肿瘤微环境(TMEs)不仅是生物化学上复杂的生态位,而且是深刻地塑造转化、基质和免疫细胞行为的机械动态景观。这篇综述介绍了基质和免疫细胞,特别是细胞毒性T细胞的机制生物学,它们是抗肿瘤免疫治疗的极有希望的候选者。我们讨论了复杂的基质动力学和基质靶向治疗(即抗纤维化、机械转导和靶向肿瘤的物理特性)如何增强免疫浸润和增加对免疫治疗的易感性。同样,机械TME特征,如刚度、粘弹性和ECM排列,通过包括YAP、Rho和整合素信号在内的机械转导途径直接影响T细胞的浸润和功能,这些途径可以通过操纵来增强实体瘤中的T细胞功能。我们还强调了捕获时空信息的新需求,这些信息对于开发针对实体肿瘤环境的下一代“物理优化”免疫疗法的设计标准至关重要。
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引用次数: 0
The dynamic tumor extracellular matrix: Biophysical cues, cellular crosstalk, and disease progression 动态肿瘤细胞外基质:生物物理线索、细胞串扰和疾病进展
IF 4.2 3区 工程技术 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-06-01 Epub Date: 2026-01-24 DOI: 10.1016/j.cobme.2026.100652
Omkar Joshi , Hellyeh Hamidi , Mathilde Mathieu , Johanna Ivaska
The interplay between diverse cell types and their extracellular matrix (ECM) is fundamental for multicellular life. The ECM is a complex meshwork of fibrillar proteins and soluble factors. Cells and their surrounding ECM interact bidirectionally, whereby cells deposit their tissue-specific ECM and remodel it enzymatically and by exerting contractile forces. The ECM in turn modulates cellular functions like gene expression, proliferation, and motility. A careful balance of this interaction is key for homeostasis, and is lost during cancer progression. Different cell types constituting a tumor including cancer and stromal cells, contribute to an imbalanced cell-ECM crosstalk within the tumor. Cumulatively, this leads to a tumor ECM characterized by particular features like increased stiffness and viscoelasticity, altered alignment, bundled fibers, etc. In this review, we discuss the advances in our understanding of the tumor ECM architecture and the multicellular interactions that help achieve it, with a special focus on increasing granularity in disentangling the contributions of individual tumor ECM features in disease progression.
不同类型的细胞及其细胞外基质(ECM)之间的相互作用是多细胞生命的基础。ECM是由纤维蛋白和可溶性因子组成的复杂网络。细胞与其周围的ECM双向相互作用,细胞沉积其组织特异性ECM并通过酶和施加收缩力对其进行重塑。ECM反过来调节细胞功能,如基因表达、增殖和运动。这种相互作用的谨慎平衡是体内平衡的关键,而在癌症进展过程中则会丢失。不同的细胞类型构成肿瘤,包括癌细胞和间质细胞,导致肿瘤内细胞- ecm串扰不平衡。累积起来,这导致肿瘤ECM具有特定特征,如刚度和粘弹性增加,排列改变,纤维束等。在这篇综述中,我们讨论了我们对肿瘤ECM结构和多细胞相互作用的理解的进展,并特别关注在解琐单个肿瘤ECM特征在疾病进展中的贡献方面增加的粒度。
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引用次数: 0
Rewriting the epigenome: CRISPR tools for biological discovery and therapeutics 重写表观基因组:用于生物发现和治疗的CRISPR工具
IF 4.2 3区 工程技术 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-06-01 Epub Date: 2026-02-21 DOI: 10.1016/j.cobme.2026.100658
Christian P. Otero , Lei S. Qi
The eukaryotic epigenome plays a central role in regulating gene expression, cellular identity, and development through dynamic, multilayered biochemical modifications to DNA, histones, and chromatin architecture. Disruption of these regulatory mechanisms contributes to a wide range of human diseases, including cancer, neurodegenerative disorders, and immunological conditions. Targeted epigenome editing offers promising discovery and therapeutic strategies by enabling the correction of aberrant epigenetic states without the need for permanent changes to the DNA sequence. The catalytically inactive CRISPR-Cas (dCas) molecule fused to epigenetic effector domains has emerged as a versatile platform for programmable, locus-specific modulation of chromatin states. These CRISPR-based epigenetic editors can deposit or remove desired epigenetic marks and alter three-dimensional genome organization to fine-tune gene expression with high specificity. Recent developments have expanded the CRISPR epigenome editing toolbox by introducing new effector domains, improving multiplexing capabilities, and enabling large-scale genetic screening, leading to novel insights into the functional genomics across various cellular contexts. However, clinical translation remains challenged by inefficient delivery and suboptimal editing efficacy in vivo. This review highlights recent advances in CRISPR-based epigenetic editing, with a focus on applications in primary cells, new tool development, and the translational potential of epigenome modulation for safe, durable, and precise therapies.
真核生物表观基因组通过对DNA、组蛋白和染色质结构的动态、多层生化修饰,在调节基因表达、细胞身份和发育中起着核心作用。这些调节机制的破坏导致了广泛的人类疾病,包括癌症、神经退行性疾病和免疫疾病。靶向表观基因组编辑提供了有希望的发现和治疗策略,可以在不需要永久改变DNA序列的情况下纠正异常的表观遗传状态。催化无活性的CRISPR-Cas (dCas)分子融合到表观遗传效应域,已经成为可编程的、位点特异性调节染色质状态的通用平台。这些基于crispr的表观遗传编辑器可以存储或删除所需的表观遗传标记,并改变三维基因组组织,以高特异性微调基因表达。最近的发展通过引入新的效应域、提高多路复用能力和实现大规模遗传筛选,扩展了CRISPR表观基因组编辑工具箱,从而对各种细胞背景下的功能基因组学产生了新的见解。然而,临床翻译仍然受到体内递送效率低下和编辑效果欠佳的挑战。本文综述了基于crispr的表观遗传编辑的最新进展,重点介绍了在原代细胞中的应用、新工具的开发以及表观基因组调控在安全、持久和精确治疗中的翻译潜力。
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引用次数: 0
The role of artificial intelligence in usability testing and its potential impact on designing inclusive medical devices and digital health tools 人工智能在可用性测试中的作用及其对设计包容性医疗设备和数字健康工具的潜在影响
IF 4.2 3区 工程技术 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-06-01 Epub Date: 2026-02-12 DOI: 10.1016/j.cobme.2026.100655
Selena Lombardi, Enid Montague
Poorly designed medical devices and digital health tools can disproportionately affect their accessibility, adoption, and effectiveness for marginalized populations, such as older adults and Black and Indigenous people of colour. Inequalities in adoption and adherence to these medical technologies can be influenced by their usability; therefore, usability testing throughout all stages of development is significant to ensure that these solutions are safe, efficient, and easy to use for diverse user populations. However, traditional usability testing methods are often resource-intensive and inconsistent, raising concerns about their effectiveness, especially for addressing the needs of vulnerable groups. With the increasing integration of artificial intelligence (AI) in usability testing, questions remain about its ability to represent the perspectives of marginalized populations. This narrative review of 35 articles examined the current state of AI integration into usability testing processes, its usefulness and ease of use for evaluating the usability of medical devices and digital health tools, and its potential impact on including marginalized community perspectives. 20 articles provided AI-informed usability testing tools exclusively for digital products, such as mobile applications. These tools primarily supported usability analysts by automating specific usability testing tasks, such as identifying usability issues, performing sentiment analysis, and scoring interfaces. Three studies demonstrated AI’s use in simulating human participants or replacing evaluators under specific conditions. However, equity considerations were limited: 16 studies did not address how their tools would impact equitable usability testing practices, and 12 provided limited acknowledgment in their discussion sections. Only three sources in the literature explicitly explored AI-supported usability tools with marginalized communities. While AI-informed usability tools show promise for formative evaluations of digital health tools, their application in diverse contexts remains limited. Future priorities include validating on-the-market and literature AI-supported usability tools with various healthcare solutions and user groups, aligning AI-informed usability practice development with usability analyst workflows, and integrating equity considerations into usability testing frameworks. Developing guidelines for both traditional and AI-informed usability methods through collaboration with experts from AI, human factors, medical, and ethics fields is critical to ensuring equitable outcomes in medical device and digital health tool evaluation.
设计不良的医疗设备和数字卫生工具会严重影响边缘化人群(如老年人、黑人和有色人种土著)的可及性、采用性和有效性。采用和坚持这些医疗技术方面的不平等可能受到其可用性的影响;因此,贯穿开发所有阶段的可用性测试对于确保这些解决方案安全、高效且易于不同用户群体使用非常重要。然而,传统的可用性测试方法往往是资源密集和不一致的,引起了对其有效性的关注,特别是在解决弱势群体的需求时。随着人工智能(AI)在可用性测试中的越来越多的集成,关于它是否能够代表边缘化人群的观点的问题仍然存在。本文对35篇文章进行了叙述性回顾,研究了人工智能融入可用性测试过程的现状、人工智能在评估医疗设备和数字健康工具可用性方面的有用性和易用性,以及人工智能对纳入边缘化社区观点的潜在影响。20篇文章提供了专门针对移动应用等数字产品的人工智能可用性测试工具。这些工具主要通过自动化特定的可用性测试任务来支持可用性分析师,例如识别可用性问题、执行情感分析和对界面进行评分。三项研究展示了人工智能在特定条件下用于模拟人类参与者或替代评估人员。然而,公平的考虑是有限的:16项研究没有说明他们的工具将如何影响公平的可用性测试实践,12项研究在讨论部分提供了有限的承认。文献中只有三个来源明确探讨了边缘化社区的人工智能支持的可用性工具。虽然人工智能可用性工具显示出对数字健康工具进行形成性评估的希望,但它们在不同背景下的应用仍然有限。未来的优先事项包括在各种医疗保健解决方案和用户群体中验证市场上和文献中人工智能支持的可用性工具,使人工智能知情的可用性实践开发与可用性分析师工作流程保持一致,并将公平性考虑整合到可用性测试框架中。通过与人工智能、人为因素、医学和伦理领域的专家合作,为传统和人工智能可用性方法制定指南,对于确保医疗设备和数字卫生工具评估的公平结果至关重要。
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引用次数: 0
Future of transdermal nanomedicine 透皮纳米医学的未来
IF 4.2 3区 工程技术 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-06-01 Epub Date: 2026-01-29 DOI: 10.1016/j.cobme.2026.100653
Ali Zarrabi, Francesco Trotta
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引用次数: 0
Next generation technologies for CRISPR-based epigenome and transcriptional modulation 基于crispr的下一代表观基因组和转录调节技术
IF 4.2 3区 工程技术 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-06-01 Epub Date: 2026-02-05 DOI: 10.1016/j.cobme.2026.100654
Rithu K. Pattali , Nikita S. Divekar , James K. Nuñez
Technologies for editing epigenetic modifications and controlling transcription in mammalian cells have revolutionized targeted gene perturbation, functional genomics, and basic research. By avoiding the generation of DNA breaks, epigenome editing serves as a safe and precise approach for altering gene expression and has emerged as a promising platform for therapeutic applications. The advent of CRISPR has contributed significantly to the expansion of the existing toolkit for programmable modulation of epigenetic and transcriptional states. This review highlights recent discoveries in engineering novel tools for epigenome editing and transcriptional modulation through rational design, high throughput screening methods, and mutational scans, which leverage the endogenous reservoir of chromatin and transcriptional effectors for targeted gene repression and activation. We also discuss the therapeutic potential of epigenome modulators and highlight the key challenges that need to be addressed to improve their safety and efficacy. Advancing our understanding of the complex mechanisms driving gene expression and overcoming current limitations will pave the way for the development of novel technologies that advance fundamental research and translational applications.
在哺乳动物细胞中编辑表观遗传修饰和控制转录的技术已经彻底改变了靶向基因扰动、功能基因组学和基础研究。通过避免DNA断裂的产生,表观基因组编辑可以作为一种安全而精确的改变基因表达的方法,并已成为一种有前景的治疗应用平台。CRISPR的出现极大地扩展了现有的可编程调节表观遗传和转录状态的工具包。本文综述了最近在表观基因组编辑和转录调节的工程新工具方面的发现,这些工具通过合理的设计、高通量筛选方法和突变扫描,利用内源性染色质和转录效应物进行靶向基因的抑制和激活。我们还讨论了表观基因组调节剂的治疗潜力,并强调了需要解决的关键挑战,以提高其安全性和有效性。推进我们对驱动基因表达的复杂机制的理解,克服当前的限制,将为推动基础研究和转化应用的新技术的发展铺平道路。
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引用次数: 0
Artificial intelligence-powered biomedical imaging: Recent achievements and challenges 人工智能驱动的生物医学成像:最近的成就和挑战
IF 4.2 3区 工程技术 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-06-01 Epub Date: 2026-01-14 DOI: 10.1016/j.cobme.2026.100650
Ashkan Ebadi , Alexander Wong
In recent years, there have been remarkable advancements in artificial intelligence (AI) techniques, particularly in their application to biomedical imaging. This integration has opened up new possibilities for early and improved diagnosis, automation, and interoperability across various medical applications. This review explores the key developments in AI-driven biomedical imaging, examining the techniques and applications that have evolved. We highlight recent enhancements in various areas, such as early-stage diagnostics and explainability. Additionally, we address the challenges and limitations while shedding light on potential research directions to further integrate AI into clinical imaging, thereby enhancing patient-centered care. By synthesizing these key advancements and ongoing challenges, we aim to underscore AI's potential to transform biomedical imaging practices.
近年来,人工智能(AI)技术取得了显著的进步,特别是在生物医学成像方面的应用。这种集成为跨各种医疗应用程序的早期和改进的诊断、自动化和互操作性开辟了新的可能性。本综述探讨了人工智能驱动的生物医学成像的关键发展,检查了已经发展的技术和应用。我们强调了最近在各个领域的改进,例如早期诊断和可解释性。此外,我们解决了挑战和局限性,同时揭示了潜在的研究方向,进一步将人工智能融入临床成像,从而加强以患者为中心的护理。通过综合这些关键进展和持续的挑战,我们的目标是强调人工智能改变生物医学成像实践的潜力。
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引用次数: 0
Porous scaffolds for in vitro modelling and monitoring of the extracellular matrix 多孔支架的体外模拟和细胞外基质的监测
IF 4.2 3区 工程技术 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-03-01 Epub Date: 2025-11-17 DOI: 10.1016/j.cobme.2025.100633
Emma L. Sumner , Ruth E. Cameron , Serena M. Best , Róisín M. Owens
Animal studies have long been considered the gold standard for studying disease and analysing drug efficacy in preclinical research. However, the use of animals for studying human systems is now more commonly regarded as ethically questionable, expensive and a poor predictor of human cell response, leading to the widespread movement towards the replacement, reduction and refinement (3Rs) of animal testing in research. This perspective provides an overview of the benefit of moving away from animal models to more sustainable three dimensional (3D) in vitro culture systems and introduces current materials for modelling the extracellular matrix. We will focus primarily on the application of porous scaffolds as we progress from materials that simply support cell hosting to materials such as conducting polymers that are also able to monitor the health of cells grown on their surface.
长期以来,动物实验一直被认为是临床前研究疾病和分析药物疗效的黄金标准。然而,使用动物来研究人体系统现在更普遍地被认为在伦理上存在问题,成本高昂,而且不能很好地预测人类细胞的反应,这导致了在研究中广泛转向动物试验的替代、减少和改进(3Rs)。这一观点概述了从动物模型转向更可持续的三维(3D)体外培养系统的好处,并介绍了目前用于模拟细胞外基质的材料。我们将主要关注多孔支架的应用,因为我们从简单地支持细胞宿主的材料发展到导电聚合物等材料,这些材料也能够监测生长在其表面的细胞的健康状况。
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引用次数: 0
From “high” to “how many”: How quantifying receptor abundance links genotype, environment, and therapeutic response 从“高”到“多少”:如何量化受体丰度将基因型、环境和治疗反应联系起来
IF 4.2 3区 工程技术 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-03-01 Epub Date: 2025-12-27 DOI: 10.1016/j.cobme.2025.100646
Yingye Fang, P.I. Imoukhuede
For decades, cell surface receptor localization has been described in qualitative terms— “high”, “low”, or “absent”—yet these descriptors mask the quantitative reality that cells can display anywhere from hundreds to hundreds of thousands of receptors, with functional consequences. This Review describes how quantifying receptor abundance transforms our understanding of cellular function and therapeutic response. We evaluate current methods for absolute receptor quantification, explore how environmental and genetic factors control receptor numbers, demonstrate how these measurements enable predictive computational models, and establish therapeutic thresholds based on precise molecular counts. Moving from asking whether receptors are present to measuring exactly how many exist, we can finally connect molecular mechanisms to clinical outcomes with mathematical precision.
几十年来,细胞表面受体定位一直用定性术语来描述——“高”、“低”或“缺失”——然而,这些描述词掩盖了定量现实,即细胞可以在任何地方显示数百到数十万个受体,并产生功能后果。这篇综述描述了量化受体丰度如何改变我们对细胞功能和治疗反应的理解。我们评估了目前的绝对受体定量方法,探索了环境和遗传因素如何控制受体数量,展示了这些测量如何实现预测计算模型,并建立了基于精确分子计数的治疗阈值。从询问受体是否存在到精确测量存在的受体数量,我们最终可以用数学精确地将分子机制与临床结果联系起来。
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引用次数: 0
Recent progress in multifunctional MXene quantum dots for cancer therapy 多功能MXene量子点用于癌症治疗的最新进展
IF 4.2 3区 工程技术 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-03-01 Epub Date: 2025-11-21 DOI: 10.1016/j.cobme.2025.100635
Raj Kumar , Aresh Sahu , Keshaw Ram Aadil , Yogendra Kumar Mishra , Ajeet Kaushik
MXenes quantum dots (MQDs), nanostructures that exhibit tailored physicochemical characteristics of MXenes with the features of quantum dots, are emerging as exceptional agents for various therapeutic applications. Considering a wide range of features, MQDs are a promising platform for photothermal, photodynamic, chemodynamic, catalytic, sonodynamic, and combination therapies, as well as bioimaging capabilities, offering effective cancer treatment options. A good control over photoluminescence, surface reactivity, and biocompatibility makes MQDs a novel, multifunctional nanocarrier for developing efficient drug delivery systems for photothermal cancer therapy with higher efficacy and fewer adverse effects. However, there is a need to explore this class of material and conduct more systematic studies to establish these materials as an efficient system for cancer therapy. In this direction, presented comprehensive report highlight the latest advancements in multifunctional MQD-based treatment modalities for cancer management. Along with the trends, the associated challenges and future perspectives are also carefully discussed in this article.
MXenes量子点(MXenes quantum dots, MQDs)是一种具有量子点特性的纳米结构,具有MXenes的物理化学特性,正在成为各种治疗应用的特殊药剂。考虑到广泛的特性,mqd是光热、光动力学、化学动力学、催化、声动力学和联合治疗以及生物成像能力的有前途的平台,提供了有效的癌症治疗选择。对光致发光、表面反应性和生物相容性的良好控制使MQDs成为一种新型的多功能纳米载体,可用于开发高效的光热癌症药物传递系统,具有更高的疗效和更少的不良反应。然而,需要对这类材料进行探索,并进行更系统的研究,以建立这些材料作为癌症治疗的有效系统。在这个方向上,提出了综合报告,重点介绍了基于mqd的多功能癌症治疗方式的最新进展。除了趋势之外,本文还仔细讨论了相关的挑战和未来前景。
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引用次数: 0
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Current Opinion in Biomedical Engineering
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