首页 > 最新文献
paperpass

Network neuroscience (Cambridge, Mass.)最新文献

英文 中文
Functional connectivity of fMRI using differential covariance predicts structural connectivity and behavioral reaction times. 使用微分协方差的fMRI功能连通性预测结构连通性和行为反应时间。
IF 4.7 Pub Date : 2022-06-01 DOI: 10.1162/netn_a_00239
Yusi Chen, Qasim Bukhari, Tiger W Lin, Terrence J Sejnowski

Recordings from resting-state functional magnetic resonance imaging (rs-fMRI) reflect the influence of pathways between brain areas. A wide range of methods have been proposed to measure this functional connectivity (FC), but the lack of "ground truth" has made it difficult to systematically validate them. Most measures of FC produce connectivity estimates that are symmetrical between brain areas. Differential covariance (dCov) is an algorithm for analyzing FC with directed graph edges. When we applied dCov to rs-fMRI recordings from the human connectome project (HCP) and anesthetized mice, dCov-FC accurately identified strong cortical connections from diffusion magnetic resonance imaging (dMRI) in individual humans and viral tract tracing in mice. In addition, those HCP subjects whose dCov-FCs were more integrated, as assessed by a graph-theoretic measure, tended to have shorter reaction times in several behavioral tests. Thus, dCov-FC was able to identify anatomically verified connectivity that yielded measures of brain integration significantly correlated with behavior.

静息状态功能磁共振成像(rs-fMRI)的记录反映了脑区之间通路的影响。已经提出了各种各样的方法来测量这种功能连通性(FC),但缺乏“基础真理”使得系统地验证它们变得困难。大多数对FC的测量产生的连通性估计在大脑区域之间是对称的。微分协方差(dCov)是一种分析具有有向图边的FC的算法。当我们将dCov应用于人类连接组项目(HCP)和麻醉小鼠的rs-fMRI记录时,dCov- fc准确地识别了人类个体的扩散磁共振成像(dMRI)和小鼠的病毒通道追踪的强皮层连接。此外,通过图论测量评估,dCov-FCs更整合的HCP受试者在几个行为测试中的反应时间往往更短。因此,dCov-FC能够识别出解剖学上经过验证的连通性,这些连通性产生了与行为显著相关的大脑整合测量。
{"title":"Functional connectivity of fMRI using differential covariance predicts structural connectivity and behavioral reaction times.","authors":"Yusi Chen,&nbsp;Qasim Bukhari,&nbsp;Tiger W Lin,&nbsp;Terrence J Sejnowski","doi":"10.1162/netn_a_00239","DOIUrl":"https://doi.org/10.1162/netn_a_00239","url":null,"abstract":"<p><p>Recordings from resting-state functional magnetic resonance imaging (rs-fMRI) reflect the influence of pathways between brain areas. A wide range of methods have been proposed to measure this functional connectivity (FC), but the lack of \"ground truth\" has made it difficult to systematically validate them. Most measures of FC produce connectivity estimates that are symmetrical between brain areas. Differential covariance (dCov) is an algorithm for analyzing FC with directed graph edges. When we applied dCov to rs-fMRI recordings from the human connectome project (HCP) and anesthetized mice, dCov-FC accurately identified strong cortical connections from diffusion magnetic resonance imaging (dMRI) in individual humans and viral tract tracing in mice. In addition, those HCP subjects whose dCov-FCs were more integrated, as assessed by a graph-theoretic measure, tended to have shorter reaction times in several behavioral tests. Thus, dCov-FC was able to identify anatomically verified connectivity that yielded measures of brain integration significantly correlated with behavior.</p>","PeriodicalId":520719,"journal":{"name":"Network neuroscience (Cambridge, Mass.)","volume":" ","pages":"614-633"},"PeriodicalIF":4.7,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9207998/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40223585","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Cooperative contributions of structural and functional connectivity to successful memory in aging. 结构和功能连接对衰老成功记忆的合作贡献。
IF 3.1 Pub Date : 2018-12-01 eCollection Date: 2019-01-01 DOI: 10.1162/netn_a_00064
Simon W Davis, Amanda Szymanski, Homa Boms, Thomas Fink, Roberto Cabeza

Understanding the precise relation between functional connectivity and structural (white matter) connectivity and how these relationships account for cognitive changes in older adults are major challenges for neuroscience. We investigate these issues using an approach in which structural equation modeling (SEM) is employed to integrate functional and structural connectivity data from younger and older adults (n = 62), analyzed with a common framework based on regions connected by canonical tract groups (CTGs). CTGs (e.g., uncinate fasciculus) serve as a common currency between functional and structural connectivity matrices, and ensure equivalent sparsity in connectome information. We used this approach to investigate the neural mechanisms supporting memory for items and memory for associations, and how they are affected by healthy aging. We found that different structural and functional CTGs made independent contributions to source and item memory performance, suggesting that both forms of connectivity underlie age-related differences in specific forms of memory. Furthermore, the relationship between functional and structural connectivity was best explained by a general relationship between latent constructs-a relationship absent in any specific CTG group. These results provide insights into the relationship between structural and functional connectivity patterns, and elucidate their relative contribution to age-related differences in source memory performance.

了解功能连接和结构(白质)连接之间的确切关系以及这些关系如何解释老年人的认知变化是神经科学的主要挑战。我们使用结构方程模型(SEM)来整合来自年轻人和老年人(n = 62)的功能和结构连接数据,并使用基于典型束群(ctg)连接区域的通用框架进行分析。ctg(例如,钩状束)作为功能和结构连接矩阵之间的通用货币,并确保连接组信息的等效稀疏性。我们使用这种方法来研究支持项目记忆和联想记忆的神经机制,以及它们如何受到健康衰老的影响。我们发现不同的结构和功能ctg对源记忆和项目记忆的表现有独立的贡献,这表明这两种形式的连接是特定形式记忆的年龄相关差异的基础。此外,功能连接和结构连接之间的关系最好用潜在构念之间的一般关系来解释,这种关系在任何特定的CTG组中都不存在。这些结果为结构和功能连接模式之间的关系提供了见解,并阐明了它们对源记忆性能的年龄相关差异的相对贡献。
{"title":"Cooperative contributions of structural and functional connectivity to successful memory in aging.","authors":"Simon W Davis, Amanda Szymanski, Homa Boms, Thomas Fink, Roberto Cabeza","doi":"10.1162/netn_a_00064","DOIUrl":"10.1162/netn_a_00064","url":null,"abstract":"<p><p>Understanding the precise relation between functional connectivity and structural (white matter) connectivity and how these relationships account for cognitive changes in older adults are major challenges for neuroscience. We investigate these issues using an approach in which structural equation modeling (SEM) is employed to integrate functional and structural connectivity data from younger and older adults (<i>n</i> = 62), analyzed with a common framework based on regions connected by canonical tract groups (CTGs). CTGs (e.g., uncinate fasciculus) serve as a common currency between functional and structural connectivity matrices, and ensure equivalent sparsity in connectome information. We used this approach to investigate the neural mechanisms supporting memory for items and memory for associations, and how they are affected by healthy aging. We found that different structural and functional CTGs made independent contributions to source and item memory performance, suggesting that both forms of connectivity underlie age-related differences in specific forms of memory. Furthermore, the relationship between functional and structural connectivity was best explained by a general relationship between latent constructs-a relationship absent in any specific CTG group. These results provide insights into the relationship between structural and functional connectivity patterns, and elucidate their relative contribution to age-related differences in source memory performance.</p>","PeriodicalId":520719,"journal":{"name":"Network neuroscience (Cambridge, Mass.)","volume":" ","pages":"173-194"},"PeriodicalIF":3.1,"publicationDate":"2018-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6516741/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37281467","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dissociating tinnitus patients from healthy controls using resting-state cyclicity analysis and clustering. 利用静息状态循环分析和聚类分析将耳鸣患者与健康对照分离。
IF 4.7 Pub Date : 2018-10-01 eCollection Date: 2019-01-01 DOI: 10.1162/netn_a_00053
Benjamin J Zimmerman, Ivan Abraham, Sara A Schmidt, Yuliy Baryshnikov, Fatima T Husain

Chronic tinnitus is a common and sometimes debilitating condition that lacks scientific consensus on physiological models of how the condition arises as well as any known cure. In this study, we applied a novel cyclicity analysis, which studies patterns of leader-follower relationships between two signals, to resting-state functional magnetic resonance imaging (rs-fMRI) data of brain regions acquired from subjects with and without tinnitus. Using the output from the cyclicity analysis, we were able to differentiate between these two groups with 58-67% accuracy by using a partial least squares discriminant analysis. Stability testing yielded a 70% classification accuracy for identifying individual subjects' data across sessions 1 week apart. Additional analysis revealed that the pairs of brain regions that contributed most to the dissociation between tinnitus and controls were those connected to the amygdala. In the controls, there were consistent temporal patterns across frontal, parietal, and limbic regions and amygdalar activity, whereas in tinnitus subjects, this pattern was much more variable. Our findings demonstrate a proof-of-principle for the use of cyclicity analysis of rs-fMRI data to better understand functional brain connectivity and to use it as a tool for the differentiation of patients and controls who may differ on specific traits.

慢性耳鸣是一种常见的,有时使人衰弱的疾病,缺乏科学共识的生理模型如何产生的条件以及任何已知的治疗方法。在这项研究中,我们应用了一种新颖的循环分析方法,研究了两个信号之间的领导-追随者关系模式,对有和无耳鸣受试者的静息状态脑区功能磁共振成像(rs-fMRI)数据进行了分析。利用循环分析的输出,我们能够通过偏最小二乘判别分析以58-67%的准确率区分这两组。稳定性测试产生了70%的分类准确率,用于识别间隔1周的个体受试者数据。进一步的分析显示,对耳鸣和对照组之间的分离贡献最大的大脑区域是那些与杏仁核相连的区域。在对照组中,在额叶、顶叶、边缘区域和杏仁核活动中存在一致的时间模式,而在耳鸣受试者中,这种模式变化很大。我们的研究结果证明了利用rs-fMRI数据的循环性分析来更好地理解功能性脑连接的原理,并将其作为区分患者和可能在特定特征上存在差异的对照组的工具。
{"title":"Dissociating tinnitus patients from healthy controls using resting-state cyclicity analysis and clustering.","authors":"Benjamin J Zimmerman,&nbsp;Ivan Abraham,&nbsp;Sara A Schmidt,&nbsp;Yuliy Baryshnikov,&nbsp;Fatima T Husain","doi":"10.1162/netn_a_00053","DOIUrl":"https://doi.org/10.1162/netn_a_00053","url":null,"abstract":"<p><p>Chronic tinnitus is a common and sometimes debilitating condition that lacks scientific consensus on physiological models of how the condition arises as well as any known cure. In this study, we applied a novel cyclicity analysis, which studies patterns of leader-follower relationships between two signals, to resting-state functional magnetic resonance imaging (rs-fMRI) data of brain regions acquired from subjects with and without tinnitus. Using the output from the cyclicity analysis, we were able to differentiate between these two groups with 58-67% accuracy by using a partial least squares discriminant analysis. Stability testing yielded a 70% classification accuracy for identifying individual subjects' data across sessions 1 week apart. Additional analysis revealed that the pairs of brain regions that contributed most to the dissociation between tinnitus and controls were those connected to the amygdala. In the controls, there were consistent temporal patterns across frontal, parietal, and limbic regions and amygdalar activity, whereas in tinnitus subjects, this pattern was much more variable. Our findings demonstrate a proof-of-principle for the use of cyclicity analysis of rs-fMRI data to better understand functional brain connectivity and to use it as a tool for the differentiation of patients and controls who may differ on specific traits.</p>","PeriodicalId":520719,"journal":{"name":"Network neuroscience (Cambridge, Mass.)","volume":" ","pages":"67-89"},"PeriodicalIF":4.7,"publicationDate":"2018-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1162/netn_a_00053","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36988517","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 26
Global connectivity of the fronto-parietal cognitive control network is related to depression symptoms in the general population. 额顶叶认知控制网络的全球连通性与一般人群的抑郁症状有关。
IF 4.7 Pub Date : 2018-10-01 eCollection Date: 2019-01-01 DOI: 10.1162/netn_a_00056
Douglas H Schultz, Takuya Ito, Levi I Solomyak, Richard H Chen, Ravi D Mill, Alan Anticevic, Michael W Cole

We all vary in our mental health, even among people not meeting diagnostic criteria for mental illness. Understanding this individual variability may reveal factors driving the risk for mental illness, as well as factors driving subclinical problems that still adversely affect quality of life. To better understand the large-scale brain network mechanisms underlying this variability, we examined the relationship between mental health symptoms and resting-state functional connectivity patterns in cognitive control systems. One such system is the fronto-parietal cognitive control network (FPN). Changes in FPN connectivity may impact mental health by disrupting the ability to regulate symptoms in a goal-directed manner. Here we test the hypothesis that FPN dysconnectivity relates to mental health symptoms even among individuals who do not meet formal diagnostic criteria but may exhibit meaningful symptom variation. We found that depression symptoms severity negatively correlated with between-network global connectivity (BGC) of the FPN. This suggests that decreased connectivity between the FPN and the rest of the brain is related to increased depression symptoms in the general population. These findings complement previous clinical studies to support the hypothesis that global FPN connectivity contributes to the regulation of mental health symptoms across both health and disease.

我们的心理健康状况各不相同,即使在不符合精神疾病诊断标准的人群中也是如此。了解这种个体差异可能会揭示驱动精神疾病风险的因素,以及驱动仍对生活质量产生不利影响的亚临床问题的因素。为了更好地理解这种变异性背后的大规模脑网络机制,我们研究了认知控制系统中心理健康症状与静息状态功能连接模式之间的关系。其中一个系统是额顶叶认知控制网络(FPN)。FPN连通性的变化可能通过破坏以目标导向的方式调节症状的能力来影响心理健康。在这里,我们检验了FPN连接障碍与心理健康症状相关的假设,即使在不符合正式诊断标准但可能表现出有意义的症状变化的个体中也是如此。我们发现抑郁症状严重程度与FPN的网络间全球连通性(BGC)呈负相关。这表明,FPN与大脑其他部分之间连接的减少与普通人群抑郁症状的增加有关。这些发现补充了先前的临床研究,以支持全球FPN连接有助于调节健康和疾病中的心理健康症状的假设。
{"title":"Global connectivity of the fronto-parietal cognitive control network is related to depression symptoms in the general population.","authors":"Douglas H Schultz,&nbsp;Takuya Ito,&nbsp;Levi I Solomyak,&nbsp;Richard H Chen,&nbsp;Ravi D Mill,&nbsp;Alan Anticevic,&nbsp;Michael W Cole","doi":"10.1162/netn_a_00056","DOIUrl":"https://doi.org/10.1162/netn_a_00056","url":null,"abstract":"<p><p>We all vary in our mental health, even among people not meeting diagnostic criteria for mental illness. Understanding this individual variability may reveal factors driving the risk for mental illness, as well as factors driving subclinical problems that still adversely affect quality of life. To better understand the large-scale brain network mechanisms underlying this variability, we examined the relationship between mental health symptoms and resting-state functional connectivity patterns in cognitive control systems. One such system is the fronto-parietal cognitive control network (FPN). Changes in FPN connectivity may impact mental health by disrupting the ability to regulate symptoms in a goal-directed manner. Here we test the hypothesis that FPN dysconnectivity relates to mental health symptoms even among individuals who do not meet formal diagnostic criteria but may exhibit meaningful symptom variation. We found that depression symptoms severity negatively correlated with between-network global connectivity (BGC) of the FPN. This suggests that decreased connectivity between the FPN and the rest of the brain is related to increased depression symptoms in the general population. These findings complement previous clinical studies to support the hypothesis that global FPN connectivity contributes to the regulation of mental health symptoms across both health and disease.</p>","PeriodicalId":520719,"journal":{"name":"Network neuroscience (Cambridge, Mass.)","volume":" ","pages":"107-123"},"PeriodicalIF":4.7,"publicationDate":"2018-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1162/netn_a_00056","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36988519","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 45
期刊
Network neuroscience (Cambridge, Mass.)
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
﹀
mjeditor
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1