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WebPDF: a browser-based software application for calculating X-ray pair distribution function WebPDF:一个基于浏览器的软件应用程序,用于计算x射线对分布函数。
IF 2 4区 化学 Q3 CHEMISTRY, ANALYTICAL Pub Date : 2026-05-01 DOI: 10.1007/s44211-026-00917-x
Hiroki Yamada, Takuto Fukuoka, Kei Watanabe, Seiya Shimono, Yuki Sada, Kengo Nakada, Toshiyuki Matsunaga, Yoshiharu Uchimoto, Koji Ohara

Pair distribution function (PDF) analysis based on X-ray total scattering is a powerful technique for elucidating local and medium-range structure in crystalline, nanocrystalline, and amorphous materials. Several software packages—such as GudrunX, PDFgetX2, and PDFgetX3—along with facility-specific programs developed at synchrotron sites, are widely used for this purpose. However, these tools typically require installation and environment-dependent configuration, which can introduce compatibility issues across operating systems and create conflicts with pre-installed software. To overcome these limitations, we developed a browser-based PDF analysis application implemented using Pyodide and PyScript, allowing it to run entirely in modern web browsers without additional installation. The software provides key functionalities, including Fourier transformation from S(Q) to G(r), calculation of g(r), back-Fourier transformation with cutoff handling, and sequential data processing. Demonstrations on representative samples confirm consistency with established programs. The software supports both synchrotron data and laboratory-based measurements using Ag radiation sources, underscoring its broad applicability. This tool enables environment-independent and consistent analyses, significantly enhancing the accessibility of X-ray total-scattering and PDF techniques.

Graphical abstract

基于x射线全散射的对分布函数(PDF)分析是一种阐明晶体、纳米晶体和非晶材料局部和中期结构的有力技术。一些软件包(如GudrunX、PDFgetX2和pdfgetx3)以及在同步加速器站点开发的特定于设施的程序被广泛用于此目的。然而,这些工具通常需要安装和依赖于环境的配置,这可能会在操作系统之间引入兼容性问题,并与预安装的软件产生冲突。为了克服这些限制,我们开发了一个基于浏览器的PDF分析应用程序,使用pyoide和PyScript实现,允许它完全运行在现代web浏览器中,而无需额外安装。该软件提供了关键功能,包括从S(Q)到G(r)的傅里叶变换,G(r)的计算,带截止处理的反傅里叶变换和顺序数据处理。代表性样品的演示证实了与既定程序的一致性。该软件支持同步加速器数据和基于实验室的测量使用银辐射源,强调其广泛的适用性。该工具可实现与环境无关且一致的分析,显著提高了x射线全散射和PDF技术的可及性。
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引用次数: 0
Copying a soft lithography master mold using an inexpensive, hobby-use UV-curable resin 复制软光刻主模具使用便宜的,业余爱好者使用的uv固化树脂。
IF 2 4区 化学 Q3 CHEMISTRY, ANALYTICAL Pub Date : 2026-04-30 DOI: 10.1007/s44211-026-00920-2
Kazuo Hosokawa, Hiroshi Kasuga, Hitoshi Ohmori

Poly(dimethylsiloxane) (PDMS) is the most widely used material for microfluidic chips because of its advantageous properties including easy fabrication through soft lithography, which means pattern transfer technique from microfabricated master molds. However, most of the master molds are made of a silicon wafer and a photoresist layer, and have two major disadvantages: (1) the fabrication process is complicated and requires specialized facilities, and (2) the fabricated master molds are fragile. Here, we describe a simple fabrication technique to produce a robust master mold by pattern transfer from an existing PDMS chip to an inexpensive, hobby-use UV-curable resin (UV resin). The process requires no specialized facilities or hazardous chemicals. The test pattern consisted of microchannels with a cross-section of 100 µm × 25 µm and a total area of 30 mm × 30 mm. This pattern was faithfully transferred from the PDMS surface to the UV resin. The inaccuracy of the solidified UV resin was evaluated to be smaller than the measurement error (< 0.2%). The UV resin mold was subsequently tested for the soft lithography of a next-generation PDMS chip. For successful soft lithography, the UV resin mold required heat treatment at 60 °C for at least 48 h prior to use. Without this treatment, substantial damage was observed on both the PDMS and the UV resin surfaces. This problem was probably caused by the inhibition of PDMS curing due to unreacted components of the UV resin remaining on the surface. The technique presented here provides a simple and low-cost route for the repetitive fabrication of identical PDMS microfluidic chips for various research fields.

Graphical abstract

聚二甲基硅氧烷(PDMS)是应用最广泛的微流控芯片材料,因为它的优点包括易于通过软光刻制造,这意味着从微制造的主模具上进行图案转移技术。然而,大多数主模是由硅片和光刻胶层制成的,并且有两个主要缺点:(1)制造过程复杂,需要专门的设施;(2)制造的主模是脆弱的。在这里,我们描述了一种简单的制造技术,通过从现有的PDMS芯片到廉价的,业余使用的UV固化树脂(UV树脂)的图案转移来生产坚固的主模具。该过程不需要专门的设备或危险化学品。试验图案由横截面为100µm × 25µm、总面积为30 mm × 30 mm的微通道组成。该图案忠实地从PDMS表面转移到UV树脂上。固化UV树脂的不准确性被评估为小于测量误差(
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引用次数: 0
Application of a Hopfield neural network to extract essential spectral patterns from ToF–SIMS spectra of peptides 应用Hopfield神经网络从多肽的ToF-SIMS光谱中提取基本光谱模式。
IF 2 4区 化学 Q3 CHEMISTRY, ANALYTICAL Pub Date : 2026-04-27 DOI: 10.1007/s44211-026-00916-y
Satoka Aoyagi, Hiromi Kato, Shun Shibayama

A recurrent neural network (RNN) system based on a Hopfield neural network (HNN) was developed to extract essential spectral patterns from the time-of-flight secondary ion mass spectrometry (ToF–SIMS) spectra of peptide samples. Because ToF–SIMS produces various fragment ions from organic molecules, the interpretation of ToF–SIMS spectra is generally complicated. ToF–SIMS is useful for peptide analysis because it detects specific amino acid fragment ions from peptides that indicate peptide information. However, the ToF–SIMS spectra also contain fragment ions that do not preserve the main structures of the original molecules, which makes them difficult to interpret. Therefore, it is crucial to extract essential spectral patterns from the ToF–SIMS spectra of organic materials. Peptides were selected as the target organic materials for this study due to their systematic chemical structures. A modified HNN was trained on the ToF–SIMS spectra of each peptide, and the trained HNNs were then used to recall patterns for various peptide ToF–SIMS spectra. The results show that the modified HNN recall essential spectra containing specific ions, including the protonated molecular ions and amino acid fragment ions of target peptides. Furthermore, the HNN results revealed differences and similarities between peptides with similar and different amino acid sequences. Thus, this study demonstrates the effectiveness of the HNN in interpreting complex spectra and its potential for preprocessing data for further analysis.

Graphical abstract

建立了一种基于Hopfield神经网络(HNN)的递归神经网络(RNN)系统,用于从多肽样品的飞行时间二次离子质谱(ToF-SIMS)光谱中提取基本光谱模式。由于ToF-SIMS从有机分子中产生各种碎片离子,因此ToF-SIMS光谱的解释通常比较复杂。ToF-SIMS对肽分析很有用,因为它可以检测肽中指示肽信息的特定氨基酸片段离子。然而,ToF-SIMS光谱也包含碎片离子,这些离子不能保留原始分子的主要结构,这使得它们难以解释。因此,从有机材料的ToF-SIMS光谱中提取基本的光谱模式是至关重要的。由于多肽具有系统的化学结构,因此选择多肽作为本研究的目标有机材料。在每个肽的ToF-SIMS光谱上训练一个改进的HNN,然后使用训练好的HNN来召回不同肽的ToF-SIMS光谱的模式。结果表明,修饰后的HNN能够回忆起含有特定离子的基本光谱,包括目标肽的质子化分子离子和氨基酸片段离子。此外,HNN结果揭示了相似和不同氨基酸序列的肽之间的差异和相似性。因此,本研究证明了HNN在解释复杂光谱方面的有效性及其对进一步分析的预处理数据的潜力。
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引用次数: 0
Robust machine learning and ensemble learning approach to predict variation in experimental data for multiple measurements and anomalies 鲁棒机器学习和集成学习方法预测多种测量和异常实验数据的变化。
IF 2 4区 化学 Q3 CHEMISTRY, ANALYTICAL Pub Date : 2026-04-24 DOI: 10.1007/s44211-026-00919-9
Yuta Sakai, Motosuke Katayama, Hiromasa Kaneko

In the field of chemistry, machine learning is widely used to develop desired properties and activities y of compounds and products from experimental conditions x. As y is measured several times, a mathematical model is constructed with y as the average value of these measurements, which cannot evaluate the variability of y. Therefore, a method was proposed to predict the variability of y by creating N sub-datasets with selected y values for each sample and constructing multiple models. However, this method reduces prediction accuracy when there are abnormal values due to measurement errors. To address these issues, we proposed a robust method that constructs multiple sub-datasets and selects only the models with the lowest mean absolute error for predictions. Validation on a film thickness and haze (light scattering intensity) dataset showed that the proposed method outperformed conventional approaches, including those that remove anomalies in advance, in predicting both the mean and variation of y. The proposed method could improve accuracy in datasets with multiple values of y and containing abnormal values without removing samples.

在化学领域,机器学习被广泛用于从实验条件x中开发化合物和产品所需的性质和活性y。由于y被多次测量,因此以y作为这些测量值的平均值构建数学模型,无法评估y的可变性。因此,提出了一种通过为每个样本创建N个子数据集并选择y值构建多个模型来预测y可变性的方法。但是,当测量误差导致异常值出现时,该方法会降低预测精度。为了解决这些问题,我们提出了一种鲁棒方法,该方法构建多个子数据集,并仅选择平均绝对误差最小的模型进行预测。在薄膜厚度和雾霾(光散射强度)数据集上的验证表明,该方法在预测y的平均值和变化方面优于传统方法,包括那些提前去除异常的方法。该方法可以在不去除样本的情况下提高具有多个y值和包含异常值的数据集的准确性。
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引用次数: 0
Research on peak shift probability method based on laser-induced plasma spectroscopy 基于激光诱导等离子体光谱的峰移概率方法研究。
IF 2 4区 化学 Q3 CHEMISTRY, ANALYTICAL Pub Date : 2026-04-23 DOI: 10.1007/s44211-026-00915-z
Yizhe Luo, Chang Liu, Jinshan Huang, Qiguo Xiao, Hongliang Li, Hui Yang, Jian Shan

The rapid and reliable in-situ detection of trace elements relevant to nuclear materials and metal elements in environmental matrices is a major challenge in the fields of environmental monitoring, nuclear safety, and resource assessment. Element identification in Laser-induced Plasma Spectroscopy (LIPS, synonymous with Laser-induced Breakdown Spectroscopy or LIBS) can be achieved by analyzing the corresponding peak information emitted by the plasma. However, due to differences in spectral databases (e.g., wavelength shift), making quick judgments remains challenging. To tackle this issue, we developed a novel data analysis strategy that explicitly accounts for spectral peak shifts. This method was evaluated using both the Akaike and Bayesian Information Criteria (AIC/ BIC) and correlation coefficients to enhance the reliability of LIPS for aerosol analysis. This approach statistically models inevitable spectral peak shifts to establish a probabilistic identification framework, offering clear evaluative criteria for detecting key elements in complex environmental samples. Experimental results demonstrate that this method substantially lowers misidentification risks and offers a robust analytical tool for field deployment and real-time environmental screening.

Graphical abstract

The alternative text for this image may have been generated using AI.
快速、可靠地原位检测与核材料有关的微量元素和环境基质中的金属元素是环境监测、核安全和资源评价等领域面临的重大挑战。激光诱导等离子体光谱(LIPS,即激光诱导击穿光谱或LIBS)中的元素鉴定可以通过分析等离子体发射的相应峰信息来实现。然而,由于光谱数据库的差异(如波长偏移),快速判断仍然具有挑战性。为了解决这个问题,我们开发了一种新的数据分析策略,明确地说明了光谱峰移。利用赤池和贝叶斯信息准则(AIC/ BIC)以及相关系数对该方法进行了评价,以提高lip用于气溶胶分析的可靠性。该方法对不可避免的光谱峰移进行统计建模,以建立概率识别框架,为检测复杂环境样本中的关键元素提供明确的评估标准。实验结果表明,该方法大大降低了误识别风险,并为现场部署和实时环境筛选提供了强大的分析工具。
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引用次数: 0
Determination of okadaic acid in scallop using microfluidic-based fluorescence polarization immunoassay 基于微流体的荧光偏振免疫分析法测定扇贝中冈田酸。
IF 2 4区 化学 Q3 CHEMISTRY, ANALYTICAL Pub Date : 2026-04-21 DOI: 10.1007/s44211-026-00897-y
Shunsuke Chida, Kazuki Takahashi, Mao Fukuyama, Motohiro Kasuya, Ayuko Imai, Anatoly V. Zherdev, Sergei A. Eremin, Masatoshi Maeki, Akihiko Ishida, Hirofumi Tani, Koji Shigemura, Akihide Hibara, Manabu Tokeshi

A microfluidic device-based fluorescence polarization immunoassay (FPIA) enabling rapid assay completion within 20–25 min was developed for the rapid screening of okadaic acid (OA) in shellfish. A fluorescent tracer was synthesized by conjugating OA to a fluorescent dye, and two anti-OA monoclonal antibodies (7E1 and 9G3) were evaluated to optimize assay performance. Binding activity tests revealed that the 9G3 antibody exhibited a lower dissociation constant and superior assay performance. Calibration curves were constructed, and the dynamic range and sensitivity of the assay were investigated, with particular emphasis on OA concentrations around the regulatory limit (0.16 mg/kg). The applicability of the developed FPIA to real samples was assessed through spike-recovery tests using scallop extracts. Although a slight decrease in sensitivity was observed due to the presence of methanol in the extracts, OA concentrations near the regulatory threshold could be reliably discriminated. These results demonstrate that the developed microfluidic FPIA provides a rapid and simple screening approach for determining whether OA concentrations in shellfish exceed established regulatory limits, thereby supporting routine monitoring and on-site analysis.

建立了一种基于微流控装置的荧光偏振免疫分析法(FPIA),可在20-25 min内快速完成检测,用于贝类中冈田酸(OA)的快速筛选。将OA与荧光染料偶联合成了一种荧光示踪剂,并对两种抗OA单克隆抗体(7E1和9G3)进行了评价,以优化检测性能。结合活性试验表明,9G3抗体具有较低的解离常数和较好的分析性能。建立了校准曲线,并研究了该方法的动态范围和灵敏度,特别强调OA浓度在规定限值(0.16 mg/kg)附近。通过扇贝提取物的峰值回收率试验,评估了所开发的FPIA对实际样品的适用性。虽然由于提取物中甲醇的存在,观察到敏感性略有下降,但OA浓度接近调节阈值可以可靠地区分。这些结果表明,所开发的微流体FPIA为确定贝类中OA浓度是否超过既定的监管限值提供了一种快速、简单的筛选方法,从而支持常规监测和现场分析。
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引用次数: 0
Recent developments in rapid diagnostic methods for pathogenic bacteria 病原菌快速诊断方法的最新进展
IF 2 4区 化学 Q3 CHEMISTRY, ANALYTICAL Pub Date : 2026-04-20 DOI: 10.1007/s44211-026-00894-1
Saori Nakagawa
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引用次数: 0
Determination of water in organic solvents by ligand-exchange reaction of Tris(2-methyl-8-quinolinolato)indium(III) complex 三(2-甲基-8-喹啉酸)铟(III)配合物配体交换反应测定有机溶剂中水的含量。
IF 2 4区 化学 Q3 CHEMISTRY, ANALYTICAL Pub Date : 2026-04-20 DOI: 10.1007/s44211-026-00911-3
Nanami Watanabe, Nobuo Uehara, Arinori Inagawa

The water content of organic solvents was determined by the ligand dissociation of a tris(2-methyl-8-quinolinolato)indium(III) complex. Water in the organic solvent reacts with the indium complex to induce a ligand-exchange reaction. The fluorescence of deprotonated 2-methyl-8-quinolinol disappears when the ligand-exchange reaction forms a neutral molecule; thus, the complex can serve as a turn-off water-detection sensor. We measured the water content of various organic solvents, including ethyl acetate, 1-octanol, and ethanol. The indium complex was dissolved in a water-containing organic solvent, the fluorescence of the 8-quinolonolate ion was measured, and determination curves were constructed based on the decrease in fluorescence intensity. To demonstrate the versatility of the present method, we measured the water content of alcoholic drinks. These results are consistent with the data obtained by Karl Fischer (KF) titration. Although the limits of detection and quantification were not as low as those of the KF titration, the simple experimental setup and procedure of this method are favorable for its application.

Graphical abstract

The alternative text for this image may have been generated using AI.
有机溶剂的含水量由三(2-甲基-8-喹啉酸)铟(III)配合物的配体解离来测定。有机溶剂中的水与铟配合物发生反应,引起配体交换反应。当配体交换反应形成中性分子时,去质子化2-甲基-8-喹啉醇的荧光消失;因此,该复合物可以作为关闭水探测传感器。我们测量了各种有机溶剂的含水量,包括乙酸乙酯、辛醇和乙醇。将铟配合物溶解于含水有机溶剂中,测量8-喹诺酮酸离子的荧光,并根据荧光强度的下降构建测定曲线。为了证明本方法的通用性,我们测量了酒精饮料的含水量。这些结果与卡尔·菲舍尔(KF)滴定法得到的数据一致。虽然该方法的检出限和定量限不如KF滴定法低,但其简单的实验装置和步骤有利于其应用。图形抽象此图像的替代文本可能是使用AI生成的。
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引用次数: 0
Sensitive determination and discrimination of fluorinated ions using ion-transfer voltammetry 用离子转移伏安法灵敏地测定和鉴别含氟离子。
IF 2 4区 化学 Q3 CHEMISTRY, ANALYTICAL Pub Date : 2026-04-17 DOI: 10.1007/s44211-026-00912-2
Kohei Uematsu, Kento Tamiya, Yuki Nara, Minato Tanaka, Hajime Katano

We propose a sensitive method for discriminating fluorinated from non-fluorinated ions using ion-transfer voltammetry. This approach employed supported liquid membranes (SLMs) impregnated with either a fluorous solvent, 1H,1H,5H-octafluoropentyl-1,1,2,2-tetrafluoroethyl ether (OFE), or an organic solvent, 1,6-dichlorohexane (DCH). Ion-transfer reactions of the fluorinated ion perfluorooctanoate (PFOA−) and various non-fluorinated anions were measured at both the SLM(OFE)|water (W) and SLM(DCH)|W interfaces. Fluorinated ions exhibit fluorophilicity, while non-fluorinated ions show fluorophobicity toward fluorous solvents. Consequently, the shifts in the recorded ion-transfer potentials for PFOA− and non-fluorinated ions between the SLM(OFE)|W and SLM(DCH)|W interfaces exhibited opposite trends, indicating that fluorinated ions can be readily discriminated through voltammetric measurements. Furthermore, electrochemical preconcentration of PFOA− into the SLM proved feasible, enabling sensitive determination of PFOA− by subsequent voltammetric measurement. The proposed method is simple and cost-effective, making it a promising approach for the analysis of problematic per- and polyfluoroalkyl substances.

Graphical abstract

The alternative text for this image may have been generated using AI.
我们提出了一种用离子转移伏安法鉴别含氟离子和非含氟离子的灵敏方法。该方法采用负载式液体膜(slm)浸渍含氟溶剂1H,1H, 5h -辛氟戊基-1,1,2,2-四氟乙醚(OFE)或有机溶剂1,6-二氯己烷(DCH)。在SLM(OFE)|水(W)和SLM(DCH) |w界面上测量了氟化离子全氟辛酸(PFOA -)和各种非氟化阴离子的离子转移反应。氟化离子表现为亲氟性,而非氟化离子对氟溶剂表现为疏氟性。因此,记录的PFOA -和非氟化离子在SLM(OFE)|W和SLM(DCH)|W界面之间的离子转移电位的变化呈现相反的趋势,表明氟化离子可以很容易地通过伏安测量来区分。此外,将PFOA -电化学预富集到SLM中被证明是可行的,从而可以通过随后的伏安测量灵敏地测定PFOA -。所提出的方法简单,成本效益高,是分析有问题的全氟烷基和多氟烷基物质的一种很有前途的方法。图形抽象此图像的替代文本可能是使用AI生成的。
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引用次数: 0
Quantification of glyphosate and glufosinate in human blood using the aqueous layer recovered from QuEChERS extraction 利用QuEChERS提取液回收的水层定量测定人体血液中的草甘膦和草铵膦。
IF 2 4区 化学 Q3 CHEMISTRY, ANALYTICAL Pub Date : 2026-04-16 DOI: 10.1007/s44211-026-00913-1
Naoki Tachiiri, Kiyotaka Usui, Sohtaro Mimasaka

The Quick, Easy, Cheap, Effective, Rugged, and Safe (QuEChERS) method is widely used as a pretreatment technique to extract a broad range of drugs and toxicants into the acetonitrile layer. However, the aqueous layer generated during the extraction process has a high-salt content and has not been analytically explored. This study focused on the unused aqueous layer and established a method for detecting the highly polar compounds glyphosate (Gly) and glufosinate (Glu) through derivatization with 9-fluorenylmethoxycarbonyl chloride, followed by liquid chromatography–tandem mass spectrometry. Under optimized conditions, both analytes were effectively separated and detected with favorable peak shapes from 50 µL of whole blood. Calibration curves exhibited good linearity over the range of 0.1–10 µg/mL, with correlation coefficients of 0.993 for Gly and 0.994 for Glu. The lower limit of quantification for both compounds was 0.1 µg/mL. The method also demonstrated acceptable precision, accuracy, process efficiency, and stability. Herein, we demonstrate that the aqueous layer generated during the QuEChERS extraction process can serve as a valuable analytical matrix for determining Gly and Glu in blood. This method can be employed by directly adding the derivatization reagent to the aqueous layer without modifying the conventional QuEChERS extraction process. This method has the ability to reduce sample consumption by employing multiple extraction layers with distinct physicochemical characteristics. This is particularly important when only a limited number of sample volumes is available such as in fatal cases or poisoning incidents.

AbstractSection Graphical abstract
The alternative text for this image may have been generated using AI.
快速,简单,廉价,有效,坚固,安全(QuEChERS)方法被广泛用作提取各种药物和有毒物质到乙腈层的预处理技术。然而,萃取过程中产生的水层含盐量高,尚未对其进行分析探索。本研究以未使用的水层为研究对象,建立了用9-氟酰甲氧羰基氯衍生化、液相色谱-串联质谱法检测高极性化合物草甘膦(glly)和草铵膦(Glu)的方法。在优化的条件下,这两种分析物都能在50µL全血中有效分离和检测到良好的峰形。在0.1 ~ 10µg/mL范围内线性良好,Gly和Glu的相关系数分别为0.993和0.994。两种化合物的定量下限均为0.1µg/mL。该方法还证明了可接受的精密度、准确度、工艺效率和稳定性。在此,我们证明了在QuEChERS提取过程中产生的水层可以作为测定血液中glly和Glu的有价值的分析矩阵。该方法无需修改传统的QuEChERS萃取工艺,直接将衍生化试剂加入到水层中即可实现。该方法通过采用具有不同物理化学特征的多个萃取层来减少样品消耗。这在只有有限数量的样品量时尤其重要,例如在致命病例或中毒事件中。此图像的替代文本可能是使用AI生成的。
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引用次数: 0
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Analytical Sciences
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