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Double Stokes polarimetry of birefringent structures. 双折射结构的双斯托克斯偏振法。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-06-26 eCollection Date: 2026-07-01 DOI: 10.1364/BOE.603139
Viktoras Mazeika, Mykolas Maciulis, Kamdin Mirsanaye, Serguei Krouglov, Mehdi Alizadeh, Lukas Kontenis, Virginijus Barzda

Birefringence of collagen fibers influences second-harmonic generation (SHG) polarimetric measurements by introducing phase retardation for the incident fundamental beam and the SHG signal. The effect of birefringence on double Stokes polarimetry (DSP) parameters is investigated by imaging unstained rat tail tendon sections of varying thicknesses. In thin sections (≈10 μm thick), birefringence effects can be neglected; however, parameters combining linear and circular polarization states are affected, indicating a presence of complex-valued achiral susceptibility ratio due to fiber chirality. In thicker samples (≈80 μm thick), birefringence significantly affects DSP polarimetric and ultrastructural parameters, although approximate in-plane fiber orientation can still be retrieved. DSP polarimetric parameters enable rapid collagen characterization and are suited for large-area whole-slide investigations in histopathology.

胶原纤维的双折射效应通过引入入射基束和SHG信号的相位延迟影响二次谐波产生(SHG)偏振测量。通过对不同厚度的未染色大鼠尾腱切片成像,研究双折射对双斯托克斯偏振(DSP)参数的影响。在薄截面(≈10 μm厚)中,双折射效应可以忽略;然而,结合线偏振态和圆偏振态的参数受到影响,表明由于纤维的手性,存在络合值的非手性磁化比。在较厚的样品(≈80 μm厚)中,双折射显著影响DSP偏振和超微结构参数,尽管仍然可以获得近似的平面内光纤方向。DSP极化参数能够快速表征胶原蛋白,适用于组织病理学中的大面积全切片调查。
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引用次数: 0
Real-time monitoring and quantitative analysis of PAG-mediated chemical cochleostomy using 1.06-µm swept-source optical coherence tomography. 1.06-µm扫描源光学相干断层扫描实时监测和定量分析pag介导的化学耳蜗造口术。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-06-26 eCollection Date: 2026-07-01 DOI: 10.1364/BOE.603374
You-Nan Tsai, Chuan-Bor Chueh, Ting-Hao Tsai, Ting-Yen Tsai, Ting-Hao Chen, Hsin-Chien Chen, Chih-Hung Wang, Hsiang-Chieh Lee

Traditional cochleostomy relies on mechanical drilling, which carries inherent risks of acoustic and thermal trauma. In this study, we performed a quantitative analysis of phosphoric acid gel (PAG)-mediated chemical cochleostomy in ex vivo mouse cochleae using a 1.06-µm swept-source optical coherence tomography (SS-OCT) system. The imaging results demonstrated that 1.06-µm OCT provides high contrast for visualizing internal anatomic features, such as the organ of Corti, and changes in cochlear architecture during the chemical etching process. Quantitative evaluation revealed a reduction in bony wall thickness and enhanced visibility of intracochlear conduits post-PAG-application. Notably, the PAG-mediated thinning mitigates signal attenuation by reducing scattering from the dense bony wall, thereby improving OCT imaging contrast of internal structures. Real-time M-mode OCT imaging successfully captured dynamic reaction kinetics, providing a reliable feedback mechanism for identifying the etching endpoint. These findings suggest that 1.06-µm SS-OCT is a feasible guidance tool for precise, hearing-preservation cochlear interventions.

传统的耳蜗造口术依赖于机械钻孔,存在固有的声损伤和热损伤风险。在这项研究中,我们使用1.06µm扫描源光学相干断层扫描(SS-OCT)系统对磷酸凝胶(PAG)介导的离体小鼠耳蜗化学造口术进行了定量分析。成像结果表明,1.06-µm OCT可以提供高对比度的内部解剖特征,如Corti器官,以及化学蚀刻过程中耳蜗结构的变化。定量评估显示,应用pag后,骨壁厚度减少,耳蜗内导管可见性增强。值得注意的是,pag介导的变薄通过减少致密骨壁的散射来减轻信号衰减,从而提高内部结构的OCT成像对比度。实时m模式OCT成像成功捕获了动态反应动力学,为确定蚀刻终点提供了可靠的反馈机制。这些发现表明,1.06-µm SS-OCT是一种可行的指导工具,用于精确的听力保护人工耳蜗干预。
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引用次数: 0
In vivo assessment of melanoma based on photoacoustic absorption and viscoelasticity imaging. 基于光声吸收和粘弹性成像的黑色素瘤体内评估。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-06-25 eCollection Date: 2026-07-01 DOI: 10.1364/BOE.603217
Yiting Tan, Ao Jiang, Yuxuan Liang, Heng Zhang, Yeling Ma, Liang Dong, Pingping Wang

Malignant melanoma tends to metastasize early, and its prognosis is extremely poor and life-threatening in advanced stages. Tumor size and lesion thickness are the most common imaging parameters used to detect melanoma. While changes in mechanical properties during the disease process are closely related to the tumor's basic composition and cellular activity, and are directly linked to its invasiveness and metastatic potential. Here, we present a dual-modality imaging system that combines photoacoustic absorption imaging (PAI) and photoacoustic viscoelasticity imaging (PAVEI) for the staging biopsies of melanoma. The tumor size and thickness can be accurately evaluated by PAI, and PAVEI helps to characterize the tumor viscoelasticity through the phase delay of photoacoustic signals. Experimental results demonstrate that the PAI-PAVEI system can comprehensively characterize the absorption characteristics and mechanical properties of tumor lesions, thereby providing essential reference for the early diagnosis, staging assessment, and efficacy prediction of melanoma.

恶性黑色素瘤倾向于早期转移,其预后极差,晚期危及生命。肿瘤大小和病变厚度是检测黑色素瘤最常用的影像学参数。而在疾病过程中力学性质的变化与肿瘤的基本组成和细胞活性密切相关,并与肿瘤的侵袭性和转移潜力直接相关。在这里,我们提出了一种结合光声吸收成像(PAI)和光声粘弹性成像(PAVEI)的双模成像系统,用于黑色素瘤的分期活检。PAI可以准确评估肿瘤的大小和厚度,PAVEI可以通过光声信号的相位延迟来表征肿瘤的粘弹性。实验结果表明,PAI-PAVEI系统可以全面表征肿瘤病变的吸收特性和力学特性,从而为黑色素瘤的早期诊断、分期评估和疗效预测提供重要参考。
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引用次数: 0
Hadamard-encoded scattered light imaging for faster, signal-enhanced mapping of brain fiber orientations. 哈达玛编码散射光成像,更快,信号增强映射大脑纤维方向。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-06-25 eCollection Date: 2026-07-01 DOI: 10.1364/BOE.596576
Dennis Scheidt, Felix Matuschke, Katrin Amunts, Miriam Menzel, Markus Axer

A deeper understanding of brain function requires resolving the intricate networks formed by neurons at the microscopic scale. Imaging the connecting nerve fibers remains a significant challenge, particularly due to the difficulty of resolving crossing fibers using conventional optical imaging techniques. Computational Scattered Light Imaging (ComSLI) addresses this by using obliquely incident light to reconstruct the in-plane orientations of nerve fibers based on their scattering profiles, enabling the resolution of fiber crossings. One approach is to use an LED display as a light source, which allows for illuminating the sample by arbitrary patterns and measuring full scattering patterns as well as angular scattering profiles. However, when using an LED display instead of a high-intensity LED spot, ComSLI is limited by a low signal and acquisition times of several seconds per image. To overcome these limitations, this work introduces Hadamard basis sampling for the angular illumination patterns, allowing an increase in illumination intensity and a corresponding reduction in measurement time. Compared to standard sampling approaches, this method yields significantly sharper defined scattering peaks, resulting in enhanced angular resolution of the scattering profiles. The Hadamard-based illumination enhances the reconstruction of cortical fiber organization, overcoming a key limitation in challenging ComSLI applications and neuroscience.

要更深入地了解大脑功能,就需要在微观尺度上解决神经元形成的复杂网络。成像连接的神经纤维仍然是一个重大的挑战,特别是由于使用传统的光学成像技术难以分辨交叉纤维。计算散射光成像(ComSLI)解决了这个问题,利用斜入射光根据神经纤维的散射剖面重建神经纤维的平面内方向,从而实现了纤维交叉的分辨率。一种方法是使用LED显示屏作为光源,它允许用任意模式照亮样品,并测量全散射模式以及角散射剖面。然而,当使用LED显示屏代替高强度LED光斑时,ComSLI受到低信号和每张图像几秒钟采集时间的限制。为了克服这些限制,本工作引入了角照明模式的阿达玛基采样,允许增加照明强度并相应减少测量时间。与标准采样方法相比,该方法产生了明显更清晰的散射峰,从而提高了散射剖面的角分辨率。基于hadamard的照明增强了皮质纤维组织的重建,克服了ComSLI应用和神经科学的一个关键限制。
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引用次数: 0
Missed isochromatic cardiac pulsation in remote photoplethysmography: detection, impact, and removal. 远距光容积脉搏图遗漏的等色心脏搏动:检测、影响和去除。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-06-24 eCollection Date: 2026-07-01 DOI: 10.1364/BOE.599752
Gurnoor Kaur, Vasudevan Lakshminarayanan, Simarjeet Singh Saini

Remote photoplethysmography (rPPG) extracts the cardiac pulse from facial video by isolating chromatic variation due to wavelength-dependent hemoglobin absorption. We report that this signal model is incomplete. A second cardiac-frequency signal is present in skin video: an isochromatic pulsation along the skin's mean reflectance direction, arising from ballistocardiographic modulation of skin surface geometry and changes in the effective scattering cross-section of the dermal vascular bed. This isochromatic component is conflated with the chromatic signal by every rPPG method we evaluated, including chrominance-based methods (POS, CHROM) and other projection or decomposition methods (OMIT, LGI, PBV, ICA). The two signals share the cardiac frequency but differ in phase and signal fidelity, and their relative directions vary with skin tone, lighting, and recording conditions. To assess whether the isochromatic component contributes significant error to rPPG, we constructed chrominance Phase-Aware Cardiac Eigenprojection (cPACE), a method that removes the isochromatic direction via a subject-adaptive projection orthogonal to the measured skin reflectance before extracting the cardiac signal through eigen-vector projection. Across UBFC-Phys (rest and speech) and the CMU-rPPG India and Sierra Leone cohorts, cross-ROI phase-locking values of the recovered signal are systematically higher under cPACE than under any other method evaluated, indicating cleaner waveform recovery. The resulting heart rate estimates achieve mean absolute error of 1.7, 3.7, 1.7, and 1.1 BPM, respectively, on these cohorts, compared to 2.8, 9.5, 16.8, and 17.8 BPM for POS with homodyne envelope correction applied for parity. Together, these results show that the isochromatic component is a major source of error in existing rPPG methods, and future methods should explicitly account for it.

远程光体积脉搏波描记(rPPG)通过分离波长依赖性血红蛋白吸收引起的色差,从面部视频中提取心脏脉搏。我们报告这个信号模型是不完整的。第二个心频信号出现在皮肤视频中:沿着皮肤平均反射方向的等色脉动,由皮肤表面几何形状的弹道心动图调制和真皮血管床有效散射截面的变化引起。通过我们评估的每一种rPPG方法,包括基于色度的方法(POS, CHROM)和其他投影或分解方法(OMIT, LGI, PBV, ICA),将该等色分量与色度信号合并。这两个信号共享心脏频率,但相位和信号保真度不同,它们的相对方向随肤色、光照和记录条件而变化。为了评估等色分量是否会对rPPG造成显著误差,我们构建了色度相位感知心脏特征投影(cPACE),该方法在通过特征向量投影提取心脏信号之前,通过与测量皮肤反射率正交的受试者自适应投影去除等色方向。在UBFC-Phys(休息和演讲)和CMU-rPPG印度和塞拉利昂队列中,cPACE下恢复信号的交叉roi锁相值比评估的任何其他方法下都要高,表明波形恢复更清晰。结果得出的心率估计值的平均绝对误差分别为1.7、3.7、1.7和1.1 BPM,而采用同差包络校正的POS的平均绝对误差为2.8、9.5、16.8和17.8 BPM。总之,这些结果表明,等色分量是现有rPPG方法的主要误差来源,未来的方法应该明确地考虑到这一点。
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引用次数: 0
Chromatic differential confocal matrix-based 3D topography and hyperspectral imaging with deep learning for osteoarthritis grading. 基于色差共焦矩阵的三维地形和高光谱成像与深度学习的骨关节炎分级。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-06-23 eCollection Date: 2026-07-01 DOI: 10.1364/BOE.596126
Xiaer Zou, Jiajing Ye, Dawei Gong, Xinhua Zhu, Junbo Liang, Sailing He

Accurate assessment of knee osteoarthritis (KOA) is limited by the current arthroscopy's reliance on subjective visual inspection. We propose a 3D spatio-spectral automatic grading framework combining deep learning with chromatic differential confocal matrix-based 3D topography and hyperspectral imaging (CDCM-THI). Our digital micromirror device-based system simultaneously captures high-resolution 3D micro-topography and hyperspectral cartilage signatures (lateral: 3.91 µm, axial: 1.96 µm, spectral: ∼15 nm). To analyze this multi-modal data, we developed an improved ResNet50 late fusion network optimized with a consistency-enhanced loss function. Evaluated on ex vivo clinical samples, our framework achieved an average cross-validation accuracy of 94.83%, significantly outperforming single-modal baselines. This non-destructive approach bridges the gap between topographical assessment and broadband optical analysis, providing a powerful quantitative tool for future deep learning-assisted arthroscopic integration.

膝关节骨性关节炎(KOA)的准确评估是有限的,目前的关节镜检查依赖于主观视觉检查。我们提出了一个将深度学习与基于色差共焦矩阵的三维地形和高光谱成像(CDCM-THI)相结合的三维空间光谱自动分级框架。我们基于数字微镜装置的系统同时捕获高分辨率3D微形貌和高光谱软骨特征(横向:3.91微米,轴向:1.96微米,光谱:~ 15纳米)。为了分析这些多模态数据,我们开发了一个改进的ResNet50后期融合网络,优化了一致性增强的损失函数。在离体临床样本上评估,我们的框架实现了94.83%的平均交叉验证准确率,显著优于单模态基线。这种非破坏性的方法弥合了地形评估和宽带光学分析之间的差距,为未来深度学习辅助关节镜整合提供了强大的定量工具。
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引用次数: 0
Depth-sensitive optical property characterization using multi-frequency laparoscopic spatial frequency domain imaging. 使用多频腹腔镜空间频域成像的深度敏感光学特性表征。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-06-23 eCollection Date: 2026-07-01 DOI: 10.1364/BOE.599110
Elias Kluiszo, Luigi Belcastro, Rasel Ahmmed, Ulas Sunar

Accurate knowledge of tissue absorption (μ a ) and reduced scattering (μs '), parameters is required to plan and monitor laparoscopic chemophototherapy (CPT) in ovarian cancer, including light dosimetry and quantitative fluorescence mapping of porphyrin-phospholipid (PoP) photobleaching and light-triggered doxorubicin (Dox) release. We implemented a depth-sensitive, multi-frequency laparoscopic spatial frequency domain imaging (SFDI) framework to improve optical-property estimation in layered tissue. A DMD-based laparoscope imaged two-layer phantoms with controlled optical contrasts and superficial thicknesses. Spatial-frequency subsets associated with different penetration depths were independently fit to recover μ a and μs ', and compared with a two-layer diffusion model. Recovered μs ' values remained bounded by the known layer references and shifted monotonically toward the superficial value as spatial frequency and top-layer thickness increased, approaching a single-layer response at high frequency/thick layers. Quantitative model comparison showed δ-P1 variants outperformed the standard diffusion approximation, reducing RMSPE between modeled and measured μs ' to 0.8-6.5% (silicone/silicone) and 1.6-8.3% (silicone/intralipid), whereas SDA errors reached ∼13.8% and 21.1%, respectively. This approach demonstrates multi-frequency laparoscopic SFDI as a practical initial step for depth-sensitive fluorescence correction for individualized CPT treatment planning and monitoring.

准确地了解组织吸收(μ a)和减少散射(μs’),这些参数是计划和监测卵巢癌腹腔镜化疗(CPT)的必要条件,包括光剂量学和卟啉-磷脂(PoP)光漂白和光触发的多柔比星(Dox)释放的定量荧光图。我们实现了一个深度敏感的多频腹腔镜空间频域成像(SFDI)框架,以改善分层组织的光学特性估计。基于dmd的腹腔镜成像具有可控光学对比度和表面厚度的双层幻影。分别拟合不同穿透深度相关的空间频率子集,恢复μ a和μs′,并与双层扩散模型进行比较。随着空间频率和顶层厚度的增加,恢复μs的值仍然以已知层参考值为界,并单调地向表层值移动,在高频/厚层处接近单层响应。定量模型比较表明δ-P1变体优于标准扩散近似,将模型和测量值之间的RMSPE降低至0.8-6.5%(硅胶/硅胶)和1.6-8.3%(硅胶/脂肪内),而SDA误差分别达到~ 13.8%和21.1%。该方法证明了多频腹腔镜SFDI作为个体化CPT治疗计划和监测中深度敏感荧光校正的实用初始步骤。
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引用次数: 0
High-sensitivity Raman spectroscopy for prostate cancer detection and tissue extraction guidance. 高灵敏度拉曼光谱用于前列腺癌检测和组织提取的指导。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-06-18 eCollection Date: 2026-07-01 DOI: 10.1364/BOE.599860
Max J Dooley, Hanlin Li, Irene Low, Mary L Christie, Morgan R Pokorny, Ariane Araquel-Lacamiento, Alex Porter, Kamran Zargar-Shoshtari, Claude Aguergaray

This study presents classification models trained to diagnose and grade prostate cancer using fresh prostate biopsies. We compare the performance of classification models with optimised sensitivity and specificity (standard models) with application-specific models designed to maximise sensitivity and negative predictive value (NPV). Standard models achieve 80% sensitivity and 81% specificity. Application-specific models, calibrated to 90% sensitivity and 95% NPV, are intended to provide clinicians with a tool they can use with confidence to support intraoperative decisions, specifically to improve tissue retention during biopsy procedures and to ensure clear surgical margins. To this end, we introduce a 5-layer algorithm that combines 5 application-specific models chosen for overall best performance. This algorithm can reduce the number of biopsy samples required for diagnosis by 47% while maintaining 90% sensitivity, 95% NPV, and 62% specificity. All models are independently validated using two large patient cohorts. These results support the targeted use of Raman spectroscopy for real-time tissue analysis in diagnostic and intraoperative settings. The technology's clinical value as a decision-support tool aligns with the shared goal of pathologists and urologists to reduce the number of prostate biopsy cores while maintaining high sensitivity for clinically significant cancer. Prior studies have improved biopsy efficiency, but their performance has been variable, and concerns remain regarding underdetection of significant disease, revealing the need for approaches that improve biopsy efficiency without increasing diagnostic risk. The technology described here provides a realistic solution for targeted biopsy guidance to support more precise and evidence-based clinical decisions.

这项研究提出了分类模型训练诊断和分级前列腺癌使用新鲜的前列腺活检。我们比较了具有优化灵敏度和特异性的分类模型(标准模型)与旨在最大化灵敏度和负预测值(NPV)的特定应用模型的性能。标准模型达到80%的灵敏度和81%的特异性。特定应用的模型,校准到90%的灵敏度和95%的NPV,旨在为临床医生提供一种工具,他们可以放心地使用,以支持术中决策,特别是在活检过程中改善组织保留,并确保清晰的手术边缘。为此,我们引入了一个5层算法,该算法结合了5个特定于应用程序的模型,以获得最佳的整体性能。该算法可将诊断所需的活检样本数量减少47%,同时保持90%的灵敏度、95%的NPV和62%的特异性。所有模型均使用两个大型患者队列进行独立验证。这些结果支持在诊断和术中使用拉曼光谱进行实时组织分析。该技术作为决策支持工具的临床价值与病理学家和泌尿科医生的共同目标一致,即减少前列腺活检芯的数量,同时保持对临床重要癌症的高灵敏度。先前的研究已经提高了活检效率,但它们的表现是可变的,并且仍然存在对重大疾病的检测不足的担忧,这表明需要在不增加诊断风险的情况下提高活检效率的方法。这里描述的技术为靶向活检指导提供了一个现实的解决方案,以支持更精确和基于证据的临床决策。
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引用次数: 0
Anatomy-guided weakly supervised learning framework for corneal nerve image denoising and enhancement. 解剖引导的角膜神经图像去噪和增强弱监督学习框架。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-06-18 eCollection Date: 2026-07-01 DOI: 10.1364/BOE.597323
Qincheng Qiao, Xinguo Hou

Corneal confocal microscopy (CCM) enables non-invasive imaging of the sub-basal nerve plexus for early diagnosis of diabetic neuropathy, but its utility is hindered by inherent noise and low contrast in raw images. We present NerveBoost, a weakly supervised framework for CCM denoising and enhancement guided by anatomical priors. Unlike supervised methods requiring paired clean data, NerveBoost uses binary nerve masks to construct a pseudo-target via region-specific gamma correction. A composite loss function integrates weighted reconstruction, gradient consistency, background smoothness, and foreground-background contrast constraints to jointly optimize noise suppression and structural enhancement within an encoder-decoder architecture. Results indicate that NerveBoost effectively enhances nerve visibility while maintaining structural fidelity, offering a robust and efficient preprocessing solution for clinical CCM analysis without requiring paired ground-truth data.

角膜共聚焦显微镜(CCM)可以对基底下神经丛进行无创成像,用于糖尿病神经病变的早期诊断,但其应用受到原始图像固有噪声和低对比度的阻碍。我们提出NerveBoost,一个弱监督框架,用于CCM去噪和增强,指导解剖先验。与需要配对干净数据的监督方法不同,NerveBoost使用二元神经掩模通过特定区域的伽马校正来构建伪目标。复合损失函数集成了加权重建、梯度一致性、背景平滑性和前景-背景对比度约束,共同优化了编码器-解码器架构中的噪声抑制和结构增强。结果表明,NerveBoost有效地增强了神经可见性,同时保持了结构保真度,为临床CCM分析提供了一种强大而高效的预处理解决方案,而不需要配对的基础真值数据。
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引用次数: 0
Erratum: NanorulerQA: quantitative quality analysis of dual-color DNA nanorulers via single molecule photobleaching counting and spatio-temporal colocalization: erratum. 通过单分子光漂白计数和时空共定位对双色DNA纳米尺子进行定量质量分析:勘误。
IF 3.2 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-06-18 eCollection Date: 2026-07-01 DOI: 10.1364/BOE.608699
Jingjing Wu, Chong Li, Yaolong Li, Xingguang Chen, Qihuan Li, Yingjun Zhang, Wei Ji, Nana Ma, Zhen-Li Huang

[This corrects the article on p. 2747 in vol. 17, PMID: 42145706.].

[这更正了第17卷第2747页的文章,PMID: 42145706]。
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引用次数: 0
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Biomedical optics express
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